Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2ZM5 BPC Identified: 66 Ambiguities: 2
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2ZM5 1!C:72!C G:C WC [cWW][XIX] 11.21 45.78; 51.59 5.82 -2.52 0.03 5.68
tRNA 2ZM5 2!C:71!C C:G WC [cWW][XIX] 10.76 52.53; 55.57 3.04 -9.31 0.22 13.46
tRNA 2ZM5 3!C:70!C C:G WC [cWW][XIX] 11.09 53.23; 51.42 1.81 -3.57 0.12 11.88
tRNA 2ZM5 4!C:69!C C:G WC [cWW][XIX] 11.11 52.1; 50.62 1.49 -7.4 0.34 16.38
tRNA 2ZM5 5!C:68!C G:C WC [cWW][XIX] 10.86 53.45; 54.72 1.27 -10.61 0.13 16.94
tRNA 2ZM5 6!C:67!C G:C WC [cWW][XIX] 10.84 53.46; 55.6 2.13 -13.77 0.52 22.61
tRNA 2ZM5 7!C:66!C A:U WC [cWW][XX] 10.58 55.33; 56.36 1.02 -13.82 0.2 13.49
tRNA 2ZM5 8!C:21!C U:A fS(sb:O2*-N1) [tSW][-] 8.25 101.67; 58.85 42.82 163.4 1.22 35.99
tRNA 2ZM5 8!C:14!C U:A rH_1 [tWH][XXIV] 9.91 34.31; 14.22 20.09 -175.5 0.31 16.66
tRNA 2ZM5 9!C:23!C A:A rS* [tHH][-] 10.93 11.82; 8.06 3.76 105.33 0.52 14.82
tRNA 2ZM5 10!C:25!C G:C WC [cWW][XIX] 10.99 50.24; 56.44 6.19 -3.79 0.15 12.82
tRNA 2ZM5 11!C:24!C C:G WC [cWW][XIX] 10.5 54.27; 52.92 1.35 -10.27 0.3 16.98
tRNA 2ZM5 12!C:23!C U:A WC [cWW][XX] 10.93 51.23; 54.1 2.87 -13.45 0.25 15.52
tRNA 2ZM5 13!C:22!C C:G WC [cWW][XIX] 10.67 55.48; 54.66 0.82 2.92 0.11 3.85
tRNA 2ZM5 14!C:21!C A:A pfS [cSW][-] 10.31 34.25; 117.38 83.13 -19.67 0.52 21.88
tRNA 2ZM5 15!C:48!C G:C rWb [tWW][XXII] 10.58 35.6; 59.97 24.37 159.35 0.26 13.37
tRNA 2ZM5 16!C:59!C U:U rWb [tWW][XIII] 8.51 44.51; 45.55 1.03 177.03 0.66 15.25
tRNA 2ZM5 18!C:55!C* G:U fS_1 [tSW][-]; fS_1 [tSW][-] 8.84 28.23; 105.82 77.59 -137.99 0.45 27.72
tRNA 2ZM5 19!C:56!C G:C WC [cWW][XIX] 10.37 62.28; 51.86 10.42 -10.68 0.91 23.75
tRNA 2ZM5 22!C:46!C G:G rH_1 [tWH][VII] 11.32 30.54; 33.79 3.25 140.6 0.35 17.75
tRNA 2ZM5 24!C:44!C G:G rH_1 [tWH][VII] 11.62 28.81; 30.69 1.88 161.36 0.12 6.41
tRNA 2ZM5 27!C:43!C G:C WC [cWW][XIX] 10.96 51.86; 53.34 1.48 4.0 0.07 5.52
tRNA 2ZM5 28!C:42!C G:C WC [cWW][XIX] 10.73 53.35; 56.54 3.19 -1.85 0.07 8.99
tRNA 2ZM5 29!C:41!C G:C WC [cWW][XIX] 10.77 53.43; 54.13 0.7 -4.67 0.53 13.52
tRNA 2ZM5 30!C:40!C G:C WC [cWW][XIX] 10.75 54.12; 57.32 3.2 -7.14 0.33 11.48
tRNA 2ZM5 31!C:39!C A:U WC [cWW][XX] 10.88 55.33; 54.88 0.45 -14.64 0.58 9.37
tRNA 2ZM5 32!C:38!C U:A sWC [---][-] 10.58 98.07; 29.8 68.26 -16.97 0.7 18.46
tRNA 2ZM5 32!C:36!C U:A fS(sb:O2*-N1) [tSW][-] 8.48 93.0; 52.2 40.8 172.23 0.92 26.76
tRNA 2ZM5 33!C:36!C U:A pS(ps:O1P-N6) [---][-] 11.06 149.54; 31.62 117.92 -89.8 0.51 54.55
tRNA 2ZM5 49!C:65!C C:G WC [cWW][XIX] 11.05 51.41; 54.12 2.71 -6.47 0.13 13.66
tRNA 2ZM5 50!C:64!C U:A WC [cWW][XX] 10.75 56.24; 55.24 1.0 -4.73 0.11 13.76
tRNA 2ZM5 51!C:63!C U:G Wb [cWW][XXVIII] 10.46 64.43; 45.61 18.81 -5.94 0.01 11.15
tRNA 2ZM5 52!C:62!C G:C WC [cWW][XIX] 10.8 53.79; 56.65 2.87 -4.48 0.18 14.58
tRNA 2ZM5 53!C:61!C G:C WC [cWW][XIX] 10.86 52.71; 54.47 1.76 -14.17 1.12 27.8
tRNA 2ZM5 54!C:58!C U:A rH_1 [tWH][XXIV] 10.15 27.47; 21.23 6.24 176.64 0.34 9.03
tRNA 2ZM5 55!C:57!C U:G S(sb:O2*-N7)_1 [---][-] 6.66 77.54; 39.99 37.56 -164.39 1.42 33.43
tRNA 2ZM5 3!D:69!D C:G Wb_mo [---][-] 12.23 47.27; 29.5 17.77 -0.15 0.05 12.96
tRNA 2ZM5 4!D:69!D C:G WC [cWW][XIX] 10.25 53.21; 48.27 4.95 -23.84 2.09 8.83
tRNA 2ZM5 5!D:68!D G:C WC [cWW][XIX] 10.57 60.1; 49.87 10.23 10.88 0.87 12.04
tRNA 2ZM5 6!D:67!D G:C WC [cWW][XIX] 10.75 53.2; 60.61 7.41 0.16 0.19 7.73
tRNA 2ZM5 7!D:66!D A:U WC [cWW][XX] 10.67 50.71; 57.44 6.73 -33.59 0.56 31.16
tRNA 2ZM5 8!D:14!D U:A rH_1 [tWH][XXIV] 10.04 27.57; 16.07 11.49 -171.37 0.58 6.72
tRNA 2ZM5 9!D:23!D A:A rS* [tHH][-] 11.54 9.61; 6.31 3.3 98.59 0.35 10.84
tRNA 2ZM5 10!D:25!D G:C WC [cWW][XIX] 10.74 54.2; 58.65 4.45 -4.97 0.7 15.88
tRNA 2ZM5 11!D:24!D C:G WC [cWW][XIX] 11.06 53.2; 49.22 3.98 -8.12 0.54 18.8
tRNA 2ZM5 12!D:23!D U:A WC [cWW][XX] 10.82 52.43; 56.54 4.1 -8.27 0.05 10.59
tRNA 2ZM5 13!D:22!D C:G WC [cWW][XIX] 10.45 58.69; 60.84 2.14 -6.24 0.07 3.76
tRNA 2ZM5 15!D:48!D G:C rWb [tWW][XXII] 10.48 39.63; 57.11 17.49 147.89 0.08 18.28
tRNA 2ZM5 16!D:59!D U:U rWb [tWW][XIII] 8.51 37.93; 46.22 8.29 169.81 0.13 10.62
tRNA 2ZM5 18!D:55!D* G:U fS_1 [tSW][-]; fS_1 [tSW][-] 8.64 33.17; 102.11 68.94 -160.09 0.54 32.45
tRNA 2ZM5 19!D:56!D G:C WC [cWW][XIX] 10.35 65.89; 57.42 8.47 -8.8 0.72 21.58
tRNA 2ZM5 24!D:44!D G:G rH_1 [tWH][VII] 11.36 26.99; 34.14 7.15 123.42 0.12 24.71
tRNA 2ZM5 27!D:43!D G:C WC [cWW][XIX] 10.82 57.83; 50.48 7.36 1.37 0.06 7.9
tRNA 2ZM5 28!D:42!D G:C WC [cWW][XIX] 11.15 52.95; 53.25 0.3 0.77 0.21 13.61
tRNA 2ZM5 29!D:41!D G:C WC [cWW][XIX] 10.94 52.87; 57.76 4.89 4.94 0.16 8.92
tRNA 2ZM5 30!D:40!D G:C WC [cWW][XIX] 10.79 52.13; 53.38 1.26 -2.46 0.38 12.22
tRNA 2ZM5 31!D:39!D A:U WC [cWW][XX] 10.95 50.59; 55.46 4.87 -15.21 0.52 12.08
tRNA 2ZM5 32!D:38!D U:A sWC [---][-] 10.61 101.58; 27.56 74.03 -20.71 0.37 16.98
tRNA 2ZM5 32!D:36!D U:A fS(sb:O2*-N1) [tSW][-] 8.4 93.91; 58.52 35.38 171.23 1.13 20.39
tRNA 2ZM5 49!D:65!D C:G WC [cWW][XIX] 10.31 57.08; 58.15 1.07 -7.17 0.84 40.11
tRNA 2ZM5 50!D:64!D U:A WC [cWW][XX] 10.51 55.78; 59.19 3.41 0.45 1.09 19.27
tRNA 2ZM5 51!D:63!D U:G Wb [cWW][XXVIII] 9.91 72.62; 50.03 22.59 -6.45 0.29 9.7
tRNA 2ZM5 52!D:62!D G:C WC [cWW][XIX] 10.69 59.78; 51.4 8.38 -0.65 0.33 24.56
tRNA 2ZM5 53!D:61!D G:C WC [cWW][XIX] 11.02 55.76; 47.43 8.33 -7.24 0.87 25.96
tRNA 2ZM5 54!D:58!D U:A rH_1 [tWH][XXIV] 10.24 31.83; 12.88 18.95 -161.68 0.09 11.79
tRNA 2ZM5 55!D:57!D U:G S(sb:O2*-N7)_1 [---][-] 6.81 80.27; 41.34 38.92 -168.15 0.39 39.64