Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2ZNI BPC Identified: 55 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2ZNI 1!C:72!C G:C WC [cWW][XIX] 10.71 56.66; 50.71 5.95 5.87 1.03 4.87
tRNA 2ZNI 2!C:71!C G:C WC [cWW][XIX] 10.51 56.75; 53.95 2.81 -5.9 0.16 20.17
tRNA 2ZNI 3!C:70!C G:C WC [cWW][XIX] 10.51 58.05; 53.67 4.37 -7.46 0.53 5.12
tRNA 2ZNI 4!C:69!C G:C WC [cWW][XIX] 10.62 57.47; 53.75 3.72 -0.48 0.43 2.65
tRNA 2ZNI 5!C:68!C G:U Wb [cWW][XXVIII] 10.6 49.69; 63.5 13.82 -9.85 0.8 17.46
tRNA 2ZNI 6!C:67!C G:C WC [cWW][XIX] 10.48 56.41; 62.1 5.69 -13.65 0.02 16.66
tRNA 2ZNI 7!C:66!C U:A WC [cWW][XX] 10.61 52.57; 57.52 4.94 2.66 0.04 3.43
tRNA 2ZNI 10!C:24!C G:C WC [cWW][XIX] 10.32 51.86; 60.87 9.02 2.94 1.24 30.28
tRNA 2ZNI 11!C:23!C A:U WC [cWW][XX] 10.79 58.86; 54.62 4.24 -1.24 0.21 5.92
tRNA 2ZNI 12!C:22!C U:A WC [cWW][XX] 10.94 54.95; 47.69 7.26 -13.12 0.21 15.6
tRNA 2ZNI 13!C:21!C C:G WC [cWW][XIX] 10.49 55.06; 52.37 2.69 -8.91 0.09 17.93
tRNA 2ZNI 14!C:59!C G:C rWb [tWW][XXII] 10.36 44.77; 61.17 16.4 -178.35 0.45 19.07
tRNA 2ZNI 21!C:47!C G:G rH_1 [tWH][VII] 11.24 32.89; 34.11 1.22 -168.09 0.82 15.42
tRNA 2ZNI 25!C:45!C A:C Wb [cWW][-] 11.21 35.61; 68.44 32.83 -8.26 0.48 11.6
tRNA 2ZNI 26!C:44!C C:G WC [cWW][XIX] 10.84 50.47; 50.86 0.39 -17.69 0.5 16.87
tRNA 2ZNI 27!C:43!C* A:U WC [cWW][XX]; Wb [---][-] 11.25 48.04; 61.47 13.43 -9.9 0.23 11.27
tRNA 2ZNI 28!C:42!C C:G WC [cWW][XIX] 10.66 59.79; 53.68 6.12 -10.45 0.05 13.95
tRNA 2ZNI 29!C:41!C G:C WC [cWW][XIX] 10.77 52.76; 51.36 1.4 -0.12 0.2 14.18
tRNA 2ZNI 30!C:40!C G:U WC [---][-] 10.77 56.28; 57.56 1.28 -7.82 0.38 15.41
tRNA 2ZNI 31!C:39!C A:U WC [cWW][XX] 10.54 57.48; 52.63 4.85 -19.02 0.23 19.43
tRNA 2ZNI 32!C:38!C C:A Wb [cWW][-] 9.83 76.43; 39.28 37.15 -20.23 0.27 18.14
tRNA 2ZNI 49!C:65!C G:U Wb [cWW][XXVIII] 9.95 51.13; 69.02 17.89 -5.63 0.2 9.19
tRNA 2ZNI 50!C:64!C C:G WC [cWW][XIX] 10.57 51.82; 57.64 5.82 -6.2 0.51 7.94
tRNA 2ZNI 51!C:63!C G:C WC [cWW][XIX] 10.41 53.87; 61.01 7.14 -8.07 0.53 16.36
tRNA 2ZNI 52!C:62!C G:C WC [cWW][XIX] 10.72 55.65; 48.8 6.85 -6.77 0.39 14.24
tRNA 2ZNI 53!C:61!C G:C WC [cWW][XIX] 10.88 60.02; 49.22 10.8 -6.96 0.36 13.48
tRNA 2ZNI 54!C:58!C U:A rH_1 [tWH][XXIV] 9.63 45.68; 9.84 35.83 177.56 0.04 3.16
tRNA 2ZNI 1!D:72!D G:C WC [cWW][XIX] 10.84 55.41; 51.06 4.35 7.32 0.94 30.43
tRNA 2ZNI 2!D:71!D G:C WC [cWW][XIX] 10.91 59.6; 52.07 7.53 -2.83 0.24 15.89
tRNA 2ZNI 3!D:70!D G:C WC [cWW][XIX] 10.72 51.68; 51.37 0.31 -4.78 0.56 0.57
tRNA 2ZNI 4!D:69!D G:C WC [cWW][XIX] 10.54 58.97; 56.99 1.98 -8.55 0.19 9.91
tRNA 2ZNI 5!D:68!D G:U Wb [cWW][XXVIII] 10.68 48.69; 60.64 11.95 -5.66 0.45 7.84
tRNA 2ZNI 6!D:67!D G:C WC [cWW][XIX] 10.71 55.51; 60.4 4.9 -9.92 0.04 11.43
tRNA 2ZNI 7!D:66!D U:A WC [cWW][XX] 10.64 55.56; 56.91 1.35 1.61 0.03 13.76
tRNA 2ZNI 10!D:24!D G:C WC [cWW][XIX] 10.42 56.37; 58.11 1.74 3.71 0.66 17.9
tRNA 2ZNI 11!D:23!D A:U WC [cWW][XX] 10.71 57.81; 55.21 2.6 -6.85 0.65 10.67
tRNA 2ZNI 12!D:22!D U:A WC [cWW][XX] 10.94 49.47; 49.55 0.08 -14.01 0.31 13.89
tRNA 2ZNI 13!D:21!D C:G WC [cWW][XIX] 10.66 51.72; 55.41 3.68 -4.44 0.5 13.87
tRNA 2ZNI 14!D:59!D G:C rWb [tWW][XXII] 10.75 48.28; 57.05 8.77 -169.25 0.12 20.42
tRNA 2ZNI 21!D:47!D G:G rH_1 [tWH][VII] 11.41 29.81; 31.49 1.68 -168.09 0.06 12.52
tRNA 2ZNI 25!D:45!D A:C Wb [cWW][-] 11.06 33.96; 65.56 31.6 -3.99 0.06 25.49
tRNA 2ZNI 26!D:44!D C:G WC [cWW][XIX] 10.65 51.89; 51.3 0.59 -20.8 0.7 32.62
tRNA 2ZNI 27!D:43!D A:U WC [cWW][XX] 11.12 53.05; 54.75 1.7 -18.15 0.05 23.89
tRNA 2ZNI 28!D:42!D C:G WC [cWW][XIX] 10.49 59.83; 56.67 3.16 -9.38 0.7 37.37
tRNA 2ZNI 29!D:41!D G:C WC [cWW][XIX] 10.35 61.29; 54.06 7.23 -1.95 0.79 15.44
tRNA 2ZNI 30!D:40!D G:U WC [---][-] 10.59 50.68; 57.36 6.68 -5.97 0.27 13.03
tRNA 2ZNI 32!D:38!D C:A S [tSH][-] 10.23 92.93; 8.36 84.57 -17.59 0.66 23.45
tRNA 2ZNI 32!D:37!D C:A sWb [---][-] 10.75 71.41; 7.5 63.91 74.51 0.02 26.9
tRNA 2ZNI 33!D:35!D U:U S(bp:N3-O2P) [---][-] 7.03 86.26; 42.37 43.88 -175.85 1.2 31.48
tRNA 2ZNI 49!D:65!D G:U Wb [cWW][XXVIII] 10.14 51.25; 70.26 19.01 0.89 0.4 3.47
tRNA 2ZNI 50!D:64!D C:G WC [cWW][XIX] 10.98 46.52; 57.12 10.6 -10.32 0.11 14.55
tRNA 2ZNI 51!D:63!D G:C WC [cWW][XIX] 10.55 51.05; 55.32 4.27 -3.15 0.63 16.44
tRNA 2ZNI 52!D:62!D G:C WC [cWW][XIX] 10.8 56.31; 55.69 0.63 -8.09 0.39 13.9
tRNA 2ZNI 53!D:61!D G:C WC [cWW][XIX] 10.65 60.99; 53.53 7.47 -3.03 0.48 15.31
tRNA 2ZNI 54!D:58!D U:A rH_1 [tWH][XXIV] 9.89 40.91; 13.24 27.67 177.82 0.03 7.75