Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2ZUE
BPC Identified: 32
Ambiguities: 0
| tRNA |
2ZUE |
901!B:972!B |
G:C |
WC [cWW][XIX] |
10.92 |
46.85; 57.03 |
10.18 |
-2.11 |
0.36 |
10.28 |
| tRNA |
2ZUE |
902!B:971!B |
G:C |
WC [cWW][XIX] |
10.75 |
52.32; 54.86 |
2.53 |
-5.1 |
0.23 |
13.03 |
| tRNA |
2ZUE |
903!B:970!B |
A:U |
WC [cWW][XX] |
10.32 |
58.12; 58.09 |
0.03 |
-2.04 |
0.02 |
4.71 |
| tRNA |
2ZUE |
904!B:969!B |
C:G |
WC [cWW][XIX] |
10.76 |
54.2; 54.66 |
0.47 |
-2.14 |
0.04 |
7.84 |
| tRNA |
2ZUE |
905!B:968!B |
C:G |
WC [cWW][XIX] |
10.74 |
54.35; 53.51 |
0.84 |
-0.94 |
0.14 |
8.18 |
| tRNA |
2ZUE |
906!B:967!B |
G:C |
WC [cWW][XIX] |
10.52 |
53.4; 52.85 |
0.56 |
-13.86 |
0.22 |
22.57 |
| tRNA |
2ZUE |
907!B:966!B |
G:C |
WC [cWW][XIX] |
10.34 |
58.27; 54.63 |
3.63 |
-14.47 |
0.07 |
15.68 |
| tRNA |
2ZUE |
908!B:921!B |
U:A |
fS(sb:O2*-N1) [tSW][-] |
8.36 |
98.04; 53.89 |
44.15 |
163.44 |
0.66 |
15.17 |
| tRNA |
2ZUE |
908!B:914!B |
U:A |
rH_1 [tWH][XXIV] |
9.97 |
36.78; 16.78 |
20.0 |
-167.75 |
0.0 |
5.31 |
| tRNA |
2ZUE |
909!B:923!B |
A:G |
rS* [tHH][-] |
12.8 |
17.53; 6.93 |
10.6 |
-0.08 |
0.8 |
36.67 |
| tRNA |
2ZUE |
910!B:945!B |
G:G |
pS_1 [cSH][-] |
8.78 |
34.27; 126.73 |
92.45 |
5.41 |
0.3 |
31.15 |
| tRNA |
2ZUE |
910!B:925!B |
G:C |
WC [cWW][XIX] |
10.51 |
53.27; 56.53 |
3.26 |
-1.62 |
0.06 |
1.99 |
| tRNA |
2ZUE |
911!B:924!B |
C:G |
WC [cWW][XIX] |
10.45 |
54.0; 53.23 |
0.77 |
-2.8 |
0.07 |
4.63 |
| tRNA |
2ZUE |
912!B:923!B |
C:G |
WC [cWW][XIX] |
10.5 |
56.5; 54.79 |
1.71 |
1.24 |
0.1 |
0.95 |
| tRNA |
2ZUE |
913!B:922!B |
U:G |
Wb [cWW][XXVIII] |
10.24 |
71.91; 38.8 |
33.11 |
0.82 |
0.14 |
6.23 |
| tRNA |
2ZUE |
914!B:921!B |
A:A |
pfS [cSW][-] |
9.46 |
34.29; 118.7 |
84.41 |
-21.69 |
0.75 |
19.59 |
| tRNA |
2ZUE |
915!B:948!B |
G:C |
rWb [tWW][XXII] |
10.62 |
37.69; 66.35 |
28.66 |
-177.09 |
0.01 |
4.12 |
| tRNA |
2ZUE |
918!B:955!B |
G:U |
fS_1 [tSW][-] |
9.02 |
29.51; 105.37 |
75.86 |
-155.45 |
0.9 |
29.78 |
| tRNA |
2ZUE |
919!B:956!B |
G:C |
WC [cWW][XIX] |
9.94 |
63.07; 51.8 |
11.28 |
-26.14 |
0.97 |
43.8 |
| tRNA |
2ZUE |
926!B:944!B |
G:A |
WC [cWW][VIII] |
12.24 |
45.89; 56.01 |
10.12 |
-9.83 |
0.54 |
29.14 |
| tRNA |
2ZUE |
927!B:943!B |
G:C |
WC [cWW][XIX] |
10.56 |
53.35; 55.46 |
2.11 |
-11.46 |
0.36 |
18.12 |
| tRNA |
2ZUE |
928!B:942!B |
C:G |
WC [cWW][XIX] |
10.58 |
56.44; 56.29 |
0.15 |
-6.37 |
0.09 |
17.9 |
| tRNA |
2ZUE |
929!B:941!B |
G:C |
WC [cWW][XIX] |
10.62 |
54.33; 57.07 |
2.74 |
-4.63 |
0.35 |
11.92 |
| tRNA |
2ZUE |
930!B:940!B |
G:C |
WC [cWW][XIX] |
10.46 |
52.27; 55.22 |
2.95 |
-7.67 |
0.41 |
14.61 |
| tRNA |
2ZUE |
931!B:939!B |
C:G |
WC [cWW][XIX] |
10.43 |
56.63; 53.13 |
3.5 |
-0.84 |
0.39 |
10.72 |
| tRNA |
2ZUE |
949!B:965!B |
C:G |
WC [cWW][XIX] |
10.68 |
54.6; 53.99 |
0.61 |
-3.11 |
0.09 |
5.88 |
| tRNA |
2ZUE |
950!B:964!B |
G:C |
WC [cWW][XIX] |
10.78 |
52.72; 53.96 |
1.24 |
-6.59 |
0.07 |
8.18 |
| tRNA |
2ZUE |
951!B:963!B |
G:C |
WC [cWW][XIX] |
10.56 |
53.84; 55.43 |
1.59 |
-4.55 |
0.05 |
9.0 |
| tRNA |
2ZUE |
952!B:962!B |
G:C |
WC [cWW][XIX] |
10.55 |
53.37; 53.68 |
0.31 |
-7.07 |
0.08 |
14.81 |
| tRNA |
2ZUE |
953!B:961!B |
G:C |
WC [cWW][XIX] |
10.58 |
54.65; 55.37 |
0.71 |
-9.2 |
0.81 |
21.79 |
| tRNA |
2ZUE |
954!B:958!B |
U:A |
rH_1 [tWH][XXIV] |
9.41 |
32.01; 21.51 |
10.5 |
163.09 |
0.16 |
12.19 |
| tRNA |
2ZUE |
955!B:957!B |
U:A |
S(sb:O2*-N7) [---][-] |
6.6 |
81.01; 38.74 |
42.27 |
-172.44 |
1.25 |
33.82 |