Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2ZY6
BPC Identified: 13
Ambiguities: 0
tRNA |
2ZY6 |
1!A:35!A |
G:C |
WC [cWW][XIX] |
10.83 |
49.99; 52.92 |
2.93 |
-12.39 |
0.18 |
15.19 |
tRNA |
2ZY6 |
2!A:34!A |
C:G |
WC [cWW][XIX] |
10.61 |
54.33; 55.43 |
1.11 |
-12.25 |
0.82 |
26.82 |
tRNA |
2ZY6 |
3!A:33!A |
C:G |
WC [cWW][XIX] |
10.66 |
53.73; 53.14 |
0.58 |
-6.75 |
0.15 |
15.37 |
tRNA |
2ZY6 |
4!A:32!A |
C:G |
WC [cWW][XIX] |
10.72 |
54.77; 53.3 |
1.47 |
-3.89 |
0.14 |
8.75 |
tRNA |
2ZY6 |
5!A:31!A |
G:C |
WC [cWW][XIX] |
10.63 |
55.82; 54.97 |
0.84 |
-1.89 |
0.01 |
5.37 |
tRNA |
2ZY6 |
6!A:30!A |
G:C |
WC [cWW][XIX] |
10.6 |
54.78; 54.11 |
0.67 |
-6.49 |
0.42 |
19.45 |
tRNA |
2ZY6 |
7!A:29!A |
A:U |
WC [cWW][XX] |
10.58 |
54.19; 53.72 |
0.47 |
-1.23 |
0.55 |
12.41 |
tRNA |
2ZY6 |
8!A:27!A |
U:A |
rH_1 [tWH][XXIV] |
9.57 |
34.13; 21.13 |
13.0 |
-157.39 |
0.01 |
8.29 |
tRNA |
2ZY6 |
9!A:26!A |
A:G |
S [tSH][XI] |
9.44 |
11.0; 88.05 |
77.05 |
-158.41 |
0.61 |
21.22 |
tRNA |
2ZY6 |
10!A:25!A |
G:C |
WC [cWW][XIX] |
10.77 |
52.49; 52.9 |
0.41 |
-16.49 |
0.36 |
21.61 |
tRNA |
2ZY6 |
12!A:24!A |
G:C |
WC [cWW][XIX] |
10.54 |
53.56; 54.34 |
0.78 |
-4.17 |
0.87 |
30.13 |
tRNA |
2ZY6 |
12!A:19!A |
G:G |
rH_1 [tWH][VII] |
11.23 |
32.23; 28.75 |
3.47 |
171.85 |
0.33 |
7.5 |
tRNA |
2ZY6 |
27!A:28!A |
A:G |
rS [tSS][-] |
7.42 |
87.28; 86.54 |
0.74 |
-106.96 |
1.81 |
77.88 |