Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2ZZM
BPC Identified: 36
Ambiguities: 0
| tRNA |
2ZZM |
2!B:72!B |
C:C |
pS [cSH][-] |
8.75 |
107.9; 22.81 |
85.09 |
-44.46 |
1.7 |
51.54 |
| tRNA |
2ZZM |
3!B:70!B |
A:U |
sWC [---][-] |
11.34 |
21.45; 64.36 |
42.91 |
67.08 |
2.41 |
45.36 |
| tRNA |
2ZZM |
5!B:68!B |
G:C |
Wb [---][-] |
10.12 |
50.32; 69.77 |
19.46 |
-36.54 |
1.22 |
43.61 |
| tRNA |
2ZZM |
6!B:67!B |
G:C |
WC [cWW][XIX] |
10.22 |
59.63; 57.54 |
2.09 |
-16.93 |
1.1 |
17.01 |
| tRNA |
2ZZM |
7!B:66!B |
G:C |
WC [cWW][XIX] |
11.27 |
48.98; 49.04 |
0.06 |
-1.28 |
0.34 |
2.51 |
| tRNA |
2ZZM |
8!B:21!B |
U:A |
fS(sb:O2*-N1) [tSW][-] |
8.58 |
97.46; 55.66 |
41.8 |
153.46 |
0.42 |
22.48 |
| tRNA |
2ZZM |
8!B:14!B |
U:A |
rH_1 [tWH][XXIV] |
9.68 |
31.69; 17.45 |
14.24 |
168.47 |
0.13 |
6.36 |
| tRNA |
2ZZM |
10!B:25!B |
G:C |
WC [cWW][XIX] |
10.75 |
48.96; 54.95 |
5.99 |
-2.53 |
0.21 |
12.08 |
| tRNA |
2ZZM |
11!B:24!B |
C:G |
WC [cWW][XIX] |
10.67 |
53.75; 53.23 |
0.52 |
-8.63 |
0.17 |
11.96 |
| tRNA |
2ZZM |
12!B:23!B |
C:G |
WC [cWW][XIX] |
10.73 |
52.22; 48.15 |
4.06 |
-7.83 |
0.32 |
10.84 |
| tRNA |
2ZZM |
13!B:22!B |
A:A |
S [tSH][-] |
9.69 |
101.51; 10.44 |
91.07 |
0.15 |
0.09 |
1.34 |
| tRNA |
2ZZM |
14!B:21!B |
A:A |
pfS [cSW][-] |
10.08 |
34.02; 115.06 |
81.04 |
-18.77 |
0.89 |
17.02 |
| tRNA |
2ZZM |
15!B:48!B |
G:C |
rWb [tWW][XXII] |
10.33 |
37.65; 61.65 |
23.99 |
-163.04 |
0.51 |
12.86 |
| tRNA |
2ZZM |
15!B:a20A |
G:C |
fS*_1 [tWS][-] |
8.99 |
98.72; 7.08 |
91.65 |
-144.7 |
0.25 |
13.6 |
| tRNA |
2ZZM |
18!B:55!B |
G:U |
fS_1 [tSW][-] |
8.71 |
28.87; 103.83 |
74.96 |
-161.67 |
0.52 |
27.19 |
| tRNA |
2ZZM |
19!B:56!B |
G:C |
WC [cWW][XIX] |
10.57 |
60.64; 46.96 |
13.68 |
-14.15 |
0.81 |
44.31 |
| tRNA |
2ZZM |
20A!B:48!B |
C:C |
rWC_o [tWW][XV] |
10.21 |
71.29; 10.68 |
60.61 |
157.27 |
0.11 |
8.43 |
| tRNA |
2ZZM |
20B!B:47H!B |
A:U |
rH_1 [tWH][XXIV] |
9.64 |
15.16; 32.34 |
17.18 |
156.52 |
0.33 |
8.6 |
| tRNA |
2ZZM |
21!B:47I!B |
A:U |
rH_1 [tWH][XXIV] |
9.48 |
16.47; 34.2 |
17.74 |
-157.42 |
1.57 |
43.08 |
| tRNA |
2ZZM |
26!B:44!B |
G:U |
Wb [cWW][XXVIII] |
10.73 |
41.46; 68.19 |
26.73 |
-2.41 |
0.27 |
14.25 |
| tRNA |
2ZZM |
27!B:43!B |
C:G |
WC [cWW][XIX] |
10.63 |
54.75; 57.05 |
2.3 |
-10.1 |
0.17 |
17.07 |
| tRNA |
2ZZM |
28!B:42!B |
U:A |
WC [cWW][XX] |
10.2 |
56.73; 58.25 |
1.52 |
0.78 |
0.22 |
4.08 |
| tRNA |
2ZZM |
29!B:41!B |
G:C |
WC [cWW][XIX] |
10.46 |
55.77; 54.98 |
0.79 |
-0.95 |
0.13 |
8.56 |
| tRNA |
2ZZM |
30!B:40!B |
G:C |
WC [cWW][XIX] |
10.43 |
55.12; 56.7 |
1.58 |
-1.78 |
0.03 |
8.58 |
| tRNA |
2ZZM |
31!B:39!B |
G:C |
WC [cWW][XIX] |
10.52 |
54.59; 55.79 |
1.2 |
-7.63 |
0.6 |
16.54 |
| tRNA |
2ZZM |
32!B:38!B |
C:A |
sWb [---][-] |
10.5 |
84.18; 33.52 |
50.66 |
1.9 |
0.26 |
16.8 |
| tRNA |
2ZZM |
45!B:47G!B |
C:G |
WC [cWW][XIX] |
10.59 |
54.92; 53.04 |
1.88 |
-10.69 |
0.3 |
19.17 |
| tRNA |
2ZZM |
46!B:47F!B |
C:G |
WC [cWW][XIX] |
10.6 |
59.55; 56.21 |
3.34 |
-4.75 |
0.12 |
15.33 |
| tRNA |
2ZZM |
47!B:47E!B |
C:G |
WC [cWW][XIX] |
10.59 |
54.21; 56.6 |
2.39 |
6.74 |
0.0 |
6.57 |
| tRNA |
2ZZM |
47A!B:47D!B |
G:G |
S_2_mo [---][-] |
9.97 |
81.45; 22.48 |
58.97 |
-140.83 |
0.44 |
18.16 |
| tRNA |
2ZZM |
47A!B:47C!B |
G:A |
S(sb:O2*-N7) [---][-] |
7.54 |
77.93; 37.06 |
40.87 |
-156.12 |
2.6 |
29.4 |
| tRNA |
2ZZM |
49!B:65!B |
C:G |
Wb [---][-] |
11.03 |
58.29; 45.59 |
12.7 |
-2.51 |
0.56 |
17.74 |
| tRNA |
2ZZM |
52!B:62!B |
G:C |
WC [cWW][XIX] |
10.73 |
52.2; 54.37 |
2.17 |
-9.49 |
0.09 |
16.64 |
| tRNA |
2ZZM |
53!B:61!B |
G:C |
WC [cWW][XIX] |
10.71 |
52.85; 53.59 |
0.74 |
-13.29 |
0.42 |
22.49 |
| tRNA |
2ZZM |
54!B:58!B |
U:A |
rH_1 [tWH][XXIV] |
9.7 |
31.03; 24.87 |
6.17 |
141.91 |
0.92 |
26.51 |
| tRNA |
2ZZM |
55!B:57!B |
U:A |
S(sb:O2*-N7) [---][-] |
6.48 |
76.62; 41.12 |
35.5 |
-173.0 |
1.12 |
30.55 |