Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 2ZZN
BPC Identified: 62
Ambiguities: 0
| tRNA |
2ZZN |
1!C:72!C |
G:C |
WC [cWW][XIX] |
10.79 |
54.18; 54.76 |
0.57 |
0.89 |
0.01 |
15.74 |
| tRNA |
2ZZN |
2!C:71!C |
C:G |
WC [cWW][XIX] |
10.51 |
56.04; 54.67 |
1.38 |
-12.74 |
0.41 |
27.12 |
| tRNA |
2ZZN |
3!C:70!C |
C:G |
WC [cWW][XIX] |
11.05 |
48.01; 51.44 |
3.44 |
-9.85 |
0.01 |
15.54 |
| tRNA |
2ZZN |
4!C:69!C |
G:C |
WC [cWW][XIX] |
10.67 |
52.62; 55.25 |
2.63 |
-13.32 |
0.09 |
18.2 |
| tRNA |
2ZZN |
5!C:68!C |
G:C |
WC [cWW][XIX] |
10.75 |
53.27; 52.54 |
0.73 |
-4.6 |
0.33 |
13.12 |
| tRNA |
2ZZN |
6!C:67!C |
G:C |
WC [cWW][XIX] |
10.96 |
50.94; 49.96 |
0.98 |
-13.54 |
0.48 |
19.59 |
| tRNA |
2ZZN |
7!C:66!C |
G:C |
WC [cWW][XIX] |
10.8 |
54.05; 52.49 |
1.56 |
-10.44 |
0.63 |
16.2 |
| tRNA |
2ZZN |
8!C:47!C |
U:A |
rpS(sb:O2*-N3) [cSS][-] |
5.89 |
145.11; 88.95 |
56.17 |
-54.0 |
0.22 |
23.79 |
| tRNA |
2ZZN |
8!C:14!C |
U:A |
rH_1 [tWH][XXIV] |
9.64 |
34.31; 18.48 |
15.83 |
-157.37 |
0.12 |
10.21 |
| tRNA |
2ZZN |
9!C:22!C |
A:A |
rS* [tHH][-] |
11.12 |
5.39; 19.99 |
14.6 |
147.08 |
0.03 |
8.96 |
| tRNA |
2ZZN |
10!C:25!C |
G:C |
WC [cWW][XIX] |
10.92 |
52.77; 51.67 |
1.1 |
-15.09 |
0.06 |
15.87 |
| tRNA |
2ZZN |
11!C:24!C |
U:G |
Wb [cWW][XXVIII] |
10.38 |
65.94; 45.36 |
20.58 |
-20.36 |
0.24 |
17.55 |
| tRNA |
2ZZN |
12!C:23!C |
C:G |
WC [cWW][XIX] |
10.77 |
54.36; 53.03 |
1.33 |
-8.3 |
0.05 |
7.4 |
| tRNA |
2ZZN |
13!C:22!C |
U:A |
WC [cWW][XX] |
10.4 |
52.39; 54.98 |
2.59 |
-20.0 |
0.01 |
18.17 |
| tRNA |
2ZZN |
14!C:47!C |
A:A |
rWb* [tWW][I] |
13.24 |
16.48; 55.12 |
38.64 |
87.57 |
1.08 |
24.41 |
| tRNA |
2ZZN |
15!C:48!C |
G:C |
rWb [tWW][XXII] |
10.71 |
29.27; 50.67 |
21.4 |
-173.07 |
0.36 |
14.16 |
| tRNA |
2ZZN |
16!C:48!C |
G:C |
srWC [---][-] |
10.29 |
61.58; 59.17 |
2.41 |
-126.95 |
2.67 |
36.11 |
| tRNA |
2ZZN |
18!C:55!C |
G:U |
fS_2 [---][-] |
9.08 |
32.72; 103.71 |
70.99 |
-138.85 |
0.8 |
47.59 |
| tRNA |
2ZZN |
19!C:56!C |
G:C |
WC [cWW][XIX] |
10.48 |
58.17; 51.19 |
6.98 |
-16.91 |
1.43 |
39.87 |
| tRNA |
2ZZN |
27!C:43!C |
G:C |
WC [cWW][XIX] |
10.71 |
53.11; 55.69 |
2.58 |
-2.04 |
0.37 |
10.05 |
| tRNA |
2ZZN |
28!C:42!C |
C:G |
WC [cWW][XIX] |
10.47 |
57.6; 55.57 |
2.03 |
-3.26 |
0.32 |
13.96 |
| tRNA |
2ZZN |
29!C:41!C |
G:C |
WC [cWW][XIX] |
10.8 |
55.22; 53.64 |
1.58 |
-2.59 |
0.04 |
7.59 |
| tRNA |
2ZZN |
30!C:40!C |
G:C |
WC [cWW][XIX] |
10.65 |
53.9; 54.63 |
0.72 |
-8.26 |
0.34 |
15.76 |
| tRNA |
2ZZN |
31!C:39!C |
A:U |
WC [cWW][XX] |
10.46 |
59.06; 51.38 |
7.68 |
-13.83 |
0.6 |
25.93 |
| tRNA |
2ZZN |
32!C:38!C |
C:A |
Wb [cWW][-] |
10.7 |
70.22; 33.98 |
36.24 |
-4.76 |
0.45 |
10.21 |
| tRNA |
2ZZN |
49!C:65!C |
G:C |
WC [cWW][XIX] |
10.55 |
55.5; 57.5 |
2.0 |
-5.53 |
0.22 |
23.27 |
| tRNA |
2ZZN |
50!C:64!C |
U:A |
WC [cWW][XX] |
10.28 |
57.87; 58.31 |
0.44 |
-10.18 |
0.22 |
16.25 |
| tRNA |
2ZZN |
51!C:63!C |
G:C |
WC [cWW][XIX] |
10.76 |
53.75; 53.06 |
0.69 |
1.98 |
0.03 |
6.64 |
| tRNA |
2ZZN |
52!C:62!C |
G:C |
WC [cWW][XIX] |
10.54 |
57.81; 56.64 |
1.17 |
-2.52 |
0.1 |
10.47 |
| tRNA |
2ZZN |
53!C:61!C |
G:C |
WC [cWW][XIX] |
10.6 |
54.99; 53.86 |
1.13 |
-13.44 |
0.74 |
28.8 |
| tRNA |
2ZZN |
54!C:58!C |
U:A |
rH_1 [tWH][XXIV] |
10.14 |
21.17; 23.97 |
2.8 |
167.17 |
0.22 |
9.58 |
| tRNA |
2ZZN |
1!D:72!D |
G:C |
WC [cWW][XIX] |
11.12 |
47.81; 50.22 |
2.41 |
-1.42 |
0.24 |
2.7 |
| tRNA |
2ZZN |
2!D:71!D |
C:G |
WC [cWW][XIX] |
11.06 |
55.06; 52.24 |
2.82 |
-3.73 |
0.5 |
19.19 |
| tRNA |
2ZZN |
3!D:70!D |
C:G |
WC [cWW][XIX] |
10.99 |
55.96; 48.05 |
7.91 |
-17.51 |
0.65 |
27.43 |
| tRNA |
2ZZN |
4!D:69!D |
G:C |
WC [cWW][XIX] |
11.09 |
48.4; 48.18 |
0.23 |
-9.18 |
0.34 |
19.97 |
| tRNA |
2ZZN |
5!D:68!D |
G:C |
WC [cWW][XIX] |
10.87 |
51.61; 51.91 |
0.3 |
1.91 |
0.01 |
16.17 |
| tRNA |
2ZZN |
6!D:67!D |
G:C |
WC [cWW][XIX] |
10.75 |
56.51; 53.77 |
2.74 |
-9.11 |
0.56 |
15.58 |
| tRNA |
2ZZN |
7!D:66!D |
G:C |
WC [cWW][XIX] |
10.89 |
49.78; 53.6 |
3.82 |
-11.78 |
0.26 |
5.25 |
| tRNA |
2ZZN |
8!D:47!D |
U:A |
rpS(sb:O2*-N3) [cSS][-] |
5.87 |
142.51; 93.08 |
49.43 |
-56.77 |
0.15 |
23.18 |
| tRNA |
2ZZN |
8!D:14!D |
U:A |
rH_1 [tWH][XXIV] |
9.63 |
30.32; 18.47 |
11.85 |
163.3 |
0.71 |
17.78 |
| tRNA |
2ZZN |
10!D:25!D |
G:C |
WC [cWW][XIX] |
11.01 |
51.34; 52.22 |
0.88 |
-7.69 |
0.47 |
2.38 |
| tRNA |
2ZZN |
11!D:24!D |
U:G |
Wb [cWW][XXVIII] |
10.78 |
55.68; 43.93 |
11.75 |
-12.87 |
0.65 |
10.97 |
| tRNA |
2ZZN |
12!D:23!D |
C:G |
WC [cWW][XIX] |
10.54 |
56.43; 56.91 |
0.48 |
-14.98 |
0.16 |
17.01 |
| tRNA |
2ZZN |
13!D:22!D |
U:A |
Wb [---][-] |
10.14 |
70.66; 50.93 |
19.73 |
-16.95 |
0.07 |
15.09 |
| tRNA |
2ZZN |
15!D:48!D |
G:C |
rWb [tWW][XXII] |
10.83 |
37.37; 58.78 |
21.41 |
-158.27 |
0.53 |
14.55 |
| tRNA |
2ZZN |
18!D:55!D |
G:U |
fS_1 [tSW][-] |
8.81 |
26.59; 100.98 |
74.4 |
-151.42 |
0.49 |
23.3 |
| tRNA |
2ZZN |
19!D:56!D |
G:C |
WC [cWW][XIX] |
10.31 |
60.2; 53.48 |
6.72 |
-21.03 |
1.28 |
41.31 |
| tRNA |
2ZZN |
27!D:43!D |
G:C |
WC [cWW][XIX] |
11.02 |
50.47; 50.1 |
0.37 |
-14.09 |
0.21 |
22.92 |
| tRNA |
2ZZN |
28!D:42!D |
C:G |
WC [cWW][XIX] |
10.72 |
51.5; 54.8 |
3.3 |
-8.22 |
0.37 |
23.34 |
| tRNA |
2ZZN |
29!D:41!D |
G:C |
WC [cWW][XIX] |
10.58 |
55.33; 56.43 |
1.1 |
-4.3 |
0.23 |
17.98 |
| tRNA |
2ZZN |
30!D:40!D |
G:C |
WC [cWW][XIX] |
10.47 |
54.17; 55.81 |
1.63 |
-14.83 |
0.46 |
32.38 |
| tRNA |
2ZZN |
31!D:39!D |
A:U |
WC [cWW][XX] |
10.89 |
52.95; 50.88 |
2.07 |
-9.61 |
0.77 |
23.85 |
| tRNA |
2ZZN |
32!D:38!D |
C:A |
Wb [cWW][-] |
10.53 |
67.61; 32.75 |
34.87 |
-1.68 |
0.17 |
15.9 |
| tRNA |
2ZZN |
33!D:35!D |
U:C |
H_2 [---][-] |
9.57 |
83.65; 34.27 |
49.37 |
-4.61 |
0.06 |
26.69 |
| tRNA |
2ZZN |
49!D:65!D |
G:C |
WC [cWW][XIX] |
10.78 |
53.48; 51.43 |
2.05 |
-4.85 |
0.04 |
5.89 |
| tRNA |
2ZZN |
50!D:64!D |
U:A |
WC [cWW][XX] |
10.76 |
52.9; 53.74 |
0.85 |
-6.77 |
0.16 |
7.23 |
| tRNA |
2ZZN |
51!D:63!D |
G:C |
WC [cWW][XIX] |
10.79 |
55.22; 52.3 |
2.92 |
-7.49 |
0.12 |
9.0 |
| tRNA |
2ZZN |
52!D:62!D |
G:C |
WC [cWW][XIX] |
10.72 |
53.65; 52.11 |
1.54 |
-8.16 |
0.02 |
16.24 |
| tRNA |
2ZZN |
53!D:61!D |
G:C |
WC [cWW][XIX] |
10.61 |
55.66; 53.87 |
1.78 |
-9.05 |
0.38 |
17.9 |
| tRNA |
2ZZN |
54!D:58!D |
U:A |
rH_1 [tWH][XXIV] |
9.82 |
28.95; 20.14 |
8.81 |
164.57 |
0.79 |
17.23 |
| tRNA |
2ZZN |
55!D:57!D |
U:A |
S(sb:O2*-N7) [---][-] |
6.97 |
73.5; 36.63 |
36.87 |
-170.31 |
1.79 |
28.03 |
| tRNA |
2ZZN |
58!D:59!D |
A:A |
rpS(sp:O2*-O2P) [---][-] |
7.23 |
141.06; 79.61 |
61.44 |
-104.69 |
0.66 |
78.42 |