Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 300D BPC Identified: 14 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HH_ribozyme 300D 25!A:15!B G:C Wb [---][-] 10.1 45.43; 63.7 18.27 -25.68 0.72 28.72
HH_ribozyme 300D 24!A:14!B U:A WC [cWW][XX] 10.42 58.28; 59.93 1.65 -17.87 0.24 23.37
HH_ribozyme 300D 23!A:13!B G:C WC [cWW][XIX] 10.16 55.18; 60.53 5.35 -4.99 0.15 11.46
HH_ribozyme 300D 22!A:12!B G:C WC [cWW][XIX] 9.92 50.52; 61.04 10.52 0.37 0.37 12.01
HH_ribozyme 300D 30!A:170!B C:C Wb [cWW][-] 7.92 83.99; 53.08 30.91 -2.99 0.45 37.95
HH_ribozyme 300D 80!A:130!B G:A S [tSH][XI] 8.52 112.41; 14.47 97.94 -13.38 0.72 32.22
HH_ribozyme 300D 90!A:120!B A:G S [tSH][XI] 9.47 11.11; 91.22 80.12 -150.98 0.15 23.55
HH_ribozyme 300D 101!A:111!B G:C WC [cWW][XIX] 10.38 54.97; 58.13 3.15 -1.27 0.58 15.43
HH_ribozyme 300D 102!A:112!B G:C Wb [---][-] 10.03 41.57; 62.65 21.08 -19.45 0.62 19.92
HH_ribozyme 300D 103!A:113!B C:G WC [cWW][XIX] 10.25 60.8; 54.57 6.22 -16.54 0.03 22.62
HH_ribozyme 300D 104!A:114!B C:G Wb [---][-] 10.51 60.84; 47.94 12.9 -10.64 0.49 5.86
HH_ribozyme 300D 152!B:162!B C:G WC [cWW][XIX] 10.61 50.75; 52.22 1.47 -17.89 0.14 21.01
HH_ribozyme 300D 153!B:163!B U:A WC [cWW][XX] 10.38 49.39; 56.52 7.13 -13.1 0.16 8.84
HH_ribozyme 300D 154!B:164!B C:G WC [cWW][XIX] 10.46 51.26; 57.01 5.75 -7.18 0.59 23.45