Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 353D
BPC Identified: 12
Ambiguities: 0
| rRNA |
353D |
1!A:24!B |
A:U |
WC [cWW][XX] |
10.63 |
54.56; 61.04 |
6.49 |
-5.43 |
0.5 |
26.75 |
| rRNA |
353D |
2!A:23!B |
U:A |
WC [cWW][XX] |
10.51 |
43.09; 59.73 |
16.64 |
-15.6 |
0.41 |
10.45 |
| rRNA |
353D |
3!A:22!B |
C:G |
Wb [---][-] |
10.45 |
62.97; 40.33 |
22.64 |
-13.71 |
0.11 |
16.16 |
| rRNA |
353D |
4!A:21!B |
C:G |
WC [cWW][XIX] |
10.38 |
52.8; 53.3 |
0.5 |
-9.97 |
0.0 |
16.33 |
| rRNA |
353D |
5!A:20!B |
C:G |
WC [cWW][XIX] |
10.55 |
61.33; 54.21 |
7.12 |
-19.89 |
0.03 |
31.69 |
| rRNA |
353D |
6!A:19!B |
C:G |
WC [cWW][XIX] |
10.52 |
49.19; 61.81 |
12.62 |
-28.55 |
0.58 |
8.35 |
| rRNA |
353D |
7!A:18!B |
C:G |
WC [cWW][XIX] |
10.37 |
49.46; 65.77 |
16.31 |
26.29 |
0.19 |
20.83 |
| rRNA |
353D |
8!A:17!B |
G:C |
Wb [---][-] |
10.67 |
48.67; 62.02 |
13.35 |
1.45 |
0.22 |
7.83 |
| rRNA |
353D |
9!A:16!B |
U:G |
WC [---][-] |
10.64 |
52.94; 60.79 |
7.85 |
-9.57 |
0.59 |
14.56 |
| rRNA |
353D |
10!A:15!B |
G:U |
Wb [cWW][XXVIII] |
10.78 |
46.18; 55.53 |
9.35 |
-15.55 |
0.27 |
18.99 |
| rRNA |
353D |
11!A:14!B |
C:G |
WC [cWW][XIX] |
10.91 |
47.87; 48.06 |
0.19 |
-6.89 |
0.14 |
7.19 |
| rRNA |
353D |
12!A:13!B |
C:G |
WC [cWW][XIX] |
10.31 |
57.2; 54.48 |
2.72 |
-20.31 |
0.08 |
22.17 |