Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 364D
BPC Identified: 27
Ambiguities: 0
| rRNA |
364D |
1!A:119!C |
U:A |
WC [cWW][XX] |
10.64 |
49.53; 58.08 |
8.55 |
-21.02 |
0.02 |
25.89 |
| rRNA |
364D |
2!A:118!C |
G:C |
WC [cWW][XIX] |
10.5 |
58.14; 51.55 |
6.59 |
17.01 |
0.24 |
19.17 |
| rRNA |
364D |
3!A:117!C |
C:G |
WC [cWW][XIX] |
10.32 |
54.94; 57.56 |
2.62 |
1.72 |
0.25 |
9.61 |
| rRNA |
364D |
4!A:116!C |
C:G |
WC [cWW][XIX] |
10.08 |
59.23; 53.12 |
6.11 |
-12.63 |
0.28 |
29.07 |
| rRNA |
364D |
5!A:115!C |
U:A |
WC [cWW][XX] |
10.13 |
61.11; 58.03 |
3.08 |
-12.04 |
0.06 |
17.33 |
| rRNA |
364D |
6!A:114!C |
G:C |
WC [cWW][XIX] |
10.7 |
58.31; 55.79 |
2.52 |
-5.07 |
0.2 |
10.07 |
| rRNA |
364D |
7!A:113!C |
G:C |
WC [cWW][XIX] |
10.64 |
52.83; 55.7 |
2.87 |
3.55 |
0.24 |
8.58 |
| rRNA |
364D |
8!A:112!C |
C:G |
WC [cWW][XIX] |
10.58 |
52.2; 44.0 |
8.2 |
6.14 |
0.42 |
3.67 |
| rRNA |
364D |
9!A:111!C |
G:U |
Wb [cWW][XXVIII] |
10.02 |
44.31; 67.74 |
23.43 |
-0.85 |
0.0 |
2.92 |
| rRNA |
364D |
10!A:110!C |
G:C |
WC [cWW][XIX] |
10.39 |
54.86; 54.78 |
0.08 |
-8.19 |
0.58 |
20.39 |
| rRNA |
364D |
11!A:109!C |
C:A |
H_2 [---][-] |
9.83 |
82.39; 17.0 |
65.39 |
-4.43 |
0.02 |
17.0 |
| rRNA |
364D |
70!B:106!C |
C:G |
WC [cWW][XIX] |
10.48 |
51.55; 53.9 |
2.35 |
3.02 |
0.55 |
8.94 |
| rRNA |
364D |
71!B:105!C |
C:G |
WC [cWW][XIX] |
10.7 |
56.56; 53.59 |
2.97 |
5.01 |
0.23 |
7.43 |
| rRNA |
364D |
72!B:104!C |
G:A |
S [tSH][XI] |
9.91 |
95.26; 6.8 |
88.47 |
17.1 |
0.48 |
14.81 |
| rRNA |
364D |
72!B:103!C |
G:U |
fS*_2 [---][-] |
10.62 |
69.38; 22.82 |
46.56 |
114.67 |
2.23 |
15.39 |
| rRNA |
364D |
73!B:103!C |
A:U |
rH_1 [tWH][XXIV] |
9.93 |
18.16; 29.18 |
11.02 |
172.26 |
0.1 |
19.76 |
| rRNA |
364D |
76!B:100!C |
G:G |
rH_2_Mo [---][-] |
13.01 |
37.21; 2.42 |
34.79 |
-98.1 |
0.22 |
12.15 |
| rRNA |
364D |
77!B:99!C |
U:A |
rH_1 [tWH][XXIV] |
9.63 |
30.2; 18.36 |
11.84 |
-167.54 |
0.99 |
45.36 |
| rRNA |
364D |
78!B:98!C |
A:G |
S [tSH][XI] |
9.87 |
10.3; 94.84 |
84.54 |
35.33 |
1.01 |
30.22 |
| rRNA |
364D |
79!B:97!C |
G:C |
WC [cWW][XIX] |
10.4 |
54.87; 52.55 |
2.32 |
29.52 |
0.23 |
43.38 |
| rRNA |
364D |
80!B:96!C |
U:G |
Wb [cWW][XXVIII] |
10.95 |
62.19; 26.23 |
35.96 |
16.59 |
0.45 |
30.96 |
| rRNA |
364D |
81!B:95!C |
G:U |
Wb [cWW][XXVIII] |
10.1 |
41.18; 78.88 |
37.7 |
-2.45 |
0.19 |
6.2 |
| rRNA |
364D |
82!B:94!C |
U:A |
WC [cWW][XX] |
10.54 |
54.47; 59.12 |
4.64 |
-12.69 |
0.1 |
18.33 |
| rRNA |
364D |
83!B:93!C |
G:C |
WC [cWW][XIX] |
10.98 |
44.33; 48.42 |
4.08 |
-7.29 |
0.19 |
5.45 |
| rRNA |
364D |
84!B:92!C |
G:C |
WC [cWW][XIX] |
10.95 |
52.25; 47.16 |
5.09 |
-15.27 |
0.05 |
18.04 |
| rRNA |
364D |
85!B:91!C |
G:C |
WC [cWW][XIX] |
10.77 |
52.31; 51.44 |
0.86 |
-6.6 |
0.02 |
20.07 |
| rRNA |
364D |
86!B:90!C |
G:C |
WC [cWW][XIX] |
10.81 |
56.97; 51.43 |
5.54 |
-4.23 |
0.48 |
1.6 |