Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 377D
BPC Identified: 12
Ambiguities: 0
| dsRNA |
377D |
1!A:12!B |
C:G |
WC [cWW][XIX] |
10.47 |
53.77; 51.86 |
1.9 |
-3.18 |
0.09 |
8.54 |
| dsRNA |
377D |
2!A:11!B |
G:C |
WC [cWW][XIX] |
10.66 |
54.59; 58.17 |
3.59 |
-11.36 |
0.14 |
17.13 |
| dsRNA |
377D |
3!A:10!B |
U:A |
WC [cWW][XX] |
10.57 |
52.13; 53.69 |
1.56 |
-8.75 |
0.12 |
16.78 |
| dsRNA |
377D |
4!A:9!B |
A:U |
WC [cWW][XX] |
10.55 |
57.13; 55.57 |
1.56 |
-6.91 |
0.2 |
10.86 |
| dsRNA |
377D |
5!A:8!B |
C:G |
WC [cWW][XIX] |
10.5 |
55.05; 54.1 |
0.95 |
-12.95 |
0.36 |
20.28 |
| dsRNA |
377D |
6!A:7!B |
G:C |
WC [cWW][XIX] |
10.4 |
54.44; 52.87 |
1.57 |
-7.98 |
0.03 |
11.23 |
| dsRNA |
377D |
13!C:24!D |
C:G |
WC [cWW][XIX] |
10.67 |
51.65; 51.28 |
0.37 |
-6.5 |
0.08 |
17.33 |
| dsRNA |
377D |
14!C:23!D |
G:C |
WC [cWW][XIX] |
10.27 |
54.46; 57.72 |
3.25 |
-12.78 |
0.16 |
19.26 |
| dsRNA |
377D |
15!C:22!D |
U:A |
WC [cWW][XX] |
10.44 |
57.32; 56.65 |
0.68 |
-11.1 |
0.1 |
15.26 |
| dsRNA |
377D |
16!C:21!D |
A:U |
WC [cWW][XX] |
10.58 |
55.98; 53.65 |
2.33 |
-10.39 |
0.01 |
17.2 |
| dsRNA |
377D |
17!C:20!D |
C:G |
WC [cWW][XIX] |
10.41 |
57.54; 55.88 |
1.66 |
-13.91 |
0.28 |
17.54 |
| dsRNA |
377D |
18!C:19!D |
G:C |
WC [cWW][XIX] |
10.67 |
55.0; 47.95 |
7.04 |
-12.03 |
0.11 |
18.85 |