Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3A3A BPC Identified: 38 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 3A3A 1!A:72!A G:C WC [cWW][XIX] 11.03 49.42; 51.79 2.36 -8.17 0.02 7.95
tRNA 3A3A 2!A:71!A C:G WC [cWW][XIX] 10.57 56.14; 54.97 1.17 -4.21 0.57 15.98
tRNA 3A3A 3!A:70!A C:G WC [cWW][XIX] 10.72 54.4; 55.23 0.82 -1.3 0.29 7.05
tRNA 3A3A 4!A:69!A C:G WC [cWW][XIX] 10.61 56.78; 55.51 1.27 0.29 0.16 5.91
tRNA 3A3A 5!A:68!A G:C WC [cWW][XIX] 10.65 54.96; 54.85 0.11 3.27 0.02 1.5
tRNA 3A3A 5A!A:67B!A G:U Wb [cWW][XXVIII] 10.39 45.16; 71.4 26.25 4.76 0.1 3.06
tRNA 3A3A 5B!A:67A!A A:U WC [cWW][XX] 9.73 62.74; 62.88 0.14 -0.14 0.04 1.43
tRNA 3A3A 6!A:67!A U:U Wb [cWW][XVI] 8.57 75.0; 47.97 27.03 -9.6 0.02 10.87
tRNA 3A3A 7!A:66!A G:C WC [cWW][XIX] 10.79 52.75; 54.45 1.69 -4.3 0.18 7.77
tRNA 3A3A 8!A:47L!A A:G rS [tSS][-] 9.27 60.12; 73.25 13.13 -165.04 1.82 40.95
tRNA 3A3A 10!A:25!A C:G WC [cWW][XIX] 10.88 51.27; 52.96 1.69 3.42 0.06 5.94
tRNA 3A3A 11!A:24!A C:G WC [cWW][XIX] 10.71 54.17; 54.97 0.8 4.43 0.15 6.86
tRNA 3A3A 12!A:23!A U:G Wb [cWW][XXVIII] 10.58 69.74; 41.86 27.88 1.85 0.02 2.51
tRNA 3A3A 13!A:22!A C:G WC [cWW][XIX] 10.71 54.54; 55.06 0.52 3.65 0.11 4.63
tRNA 3A3A 14!A:21!A A:U WC [cWW][XX] 10.39 58.29; 56.6 1.69 -0.44 0.0 1.59
tRNA 3A3A 15!A:20A!A G:C WC [cWW][XIX] 10.77 54.07; 54.32 0.25 3.86 0.07 3.51
tRNA 3A3A 16!A:59!A U:U rWb [tWW][XIII] 8.65 43.72; 46.51 2.79 -157.27 0.24 17.01
tRNA 3A3A 18!A:55!A G:U fS_1 [tSW][-] 9.05 25.75; 106.37 80.62 -154.52 0.13 12.08
tRNA 3A3A 19!A:56!A G:C WC [cWW][XIX] 10.9 51.17; 46.15 5.03 -9.66 0.21 11.39
tRNA 3A3A 19!A:20!A G:U pS* [cHS][-] 6.27 127.95; 65.15 62.8 23.16 0.71 22.77
tRNA 3A3A 26!A:44!A U:A WC [cWW][XX] 10.69 55.12; 52.83 2.3 0.77 0.11 5.75
tRNA 3A3A 27!A:43!A G:U Wb [cWW][XXVIII] 10.28 41.69; 73.25 31.56 -0.12 0.01 4.36
tRNA 3A3A 28!A:42!A C:G WC [cWW][XIX] 10.63 55.29; 54.98 0.31 -2.73 0.14 7.17
tRNA 3A3A 29!A:41!A A:U WC [cWW][XX] 10.46 58.77; 56.55 2.22 -2.58 0.04 4.21
tRNA 3A3A 30!A:40!A G:C WC [cWW][XIX] 10.74 56.79; 52.63 4.16 3.52 0.13 0.92
tRNA 3A3A 31!A:39!A G:C WC [cWW][XIX] 10.74 53.09; 53.97 0.89 -12.28 0.17 12.8
tRNA 3A3A 45!A:48!A G:A WC [cWW][VIII] 12.44 48.5; 54.93 6.43 6.07 0.25 12.18
tRNA 3A3A 46!A:47L!A C:G WC [cWW][XIX] 10.7 54.07; 55.07 1.0 -11.63 0.04 12.84
tRNA 3A3A 47!A:47K!A U:A WC [cWW][XX] 10.66 54.43; 54.67 0.24 -4.32 0.02 6.07
tRNA 3A3A 47A!A:47J!A G:C WC [cWW][XIX] 10.92 55.59; 52.55 3.04 0.14 0.06 1.55
tRNA 3A3A 47B!A:47I!A U:A WC [cWW][XX] 10.78 53.01; 52.97 0.04 -4.64 0.06 3.47
tRNA 3A3A 47C!A:47H!A C:G WC [cWW][XIX] 10.81 57.57; 53.66 3.91 2.53 0.09 3.59
tRNA 3A3A 50!A:64!A G:C WC [cWW][XIX] 10.55 54.0; 55.62 1.62 -5.7 0.88 20.91
tRNA 3A3A 51!A:63!A U:A WC [cWW][XX] 10.09 58.19; 60.36 2.16 -14.62 0.65 20.31
tRNA 3A3A 52!A:62!A G:C WC [cWW][XIX] 10.52 54.3; 55.12 0.82 -6.86 0.16 1.64
tRNA 3A3A 53!A:61!A G:C WC [cWW][XIX] 10.38 54.35; 53.63 0.73 -15.62 0.02 14.26
tRNA 3A3A 54!A:58!A U:A rH_1 [tWH][XXIV] 9.37 27.19; 19.2 7.99 162.29 0.02 9.11
tRNA 3A3A 55!A:57!A U:A S(sb:O2*-N7) [---][-] 6.22 73.06; 46.03 27.03 -169.83 2.45 20.05