Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3A6P BPC Identified: 42 Ambiguities: 2
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
miRNA 3A6P 1!D:61!E G:C WC [cWW][XIX] 10.73 50.31; 50.26 0.05 -19.7 0.6 28.95
miRNA 3A6P 2!D:60!E G:C WC [cWW][XIX] 10.88 52.23; 49.86 2.37 -15.31 0.02 20.03
miRNA 3A6P 3!D:59!E U:G Wb [cWW][XXVIII] 10.79 63.46; 41.05 22.41 -10.67 0.08 7.95
miRNA 3A6P 4!D:58!E A:U WC [cWW][XX] 11.0 51.92; 45.01 6.91 -16.06 0.07 21.67
miRNA 3A6P 5!D:57!E A:U WC [cWW][XX] 10.95 51.78; 51.26 0.52 -14.77 0.25 15.74
miRNA 3A6P 6!D:56!E A:U WC [cWW][XX] 10.66 47.78; 56.14 8.36 -15.22 0.07 18.74
miRNA 3A6P 7!D:55!E C:G WC [cWW][XIX] 10.71 52.91; 60.49 7.58 -11.57 0.33 19.06
miRNA 3A6P 8!D:54!E A:U WC [cWW][XX] 10.83 54.43; 53.64 0.79 -11.46 0.2 13.36
miRNA 3A6P 9!D:53!E* U:A WC [cWW][XX]; Wb* [---][-] 10.68 49.73; 60.09 10.36 -12.42 0.17 22.51
miRNA 3A6P 10!D:52!E C:G WC [cWW][XIX] 10.9 54.03; 56.43 2.4 -11.58 0.09 22.61
miRNA 3A6P 11!D:51!E C:G WC [cWW][XIX] 11.11 56.0; 55.37 0.63 1.96 0.68 23.06
miRNA 3A6P 14!D:50!E G:C WC [cWW][XIX] 11.74 40.68; 43.83 3.15 -16.49 0.28 25.75
miRNA 3A6P 15!D:49!E A:U WC [cWW][XX] 10.1 58.71; 60.31 1.6 -5.41 0.06 27.01
miRNA 3A6P 16!D:48!E C:G WC [cWW][XIX] 10.5 55.54; 60.3 4.75 -9.51 0.36 28.79
miRNA 3A6P 17!D:47!E U:A WC [cWW][XX] 10.67 49.95; 60.68 10.73 -9.7 0.14 11.92
miRNA 3A6P 18!D:46!E G:C WC_Mo [cWW][XIX] 10.29 63.98; 65.44 1.46 -12.31 0.78 21.86
miRNA 3A6P 19!D:45!E G:U WC [---][-] 10.7 52.86; 61.1 8.24 1.8 0.87 22.83
miRNA 3A6P 20!D:44!E A:U WC [cWW][XX] 10.93 44.62; 51.69 7.07 11.52 0.27 19.99
miRNA 3A6P 21!D:43!E A:U WC [cWW][XX] 10.46 54.27; 54.24 0.03 5.83 0.01 11.56
miRNA 3A6P 22!D:42!E G:C WC [cWW][XIX] 10.78 50.49; 61.98 11.48 -9.87 0.65 23.05
miRNA 3A6P 24!D:40!E U:G Wb [cWW][XXVIII] 10.87 58.98; 42.98 16.0 2.31 0.63 20.72
miRNA 3A6P 1!I:61!J G:C WC [cWW][XIX] 10.85 50.88; 50.03 0.85 -17.19 0.51 24.2
miRNA 3A6P 2!I:60!J G:C WC [cWW][XIX] 11.01 50.97; 48.27 2.7 -14.3 0.09 18.41
miRNA 3A6P 3!I:59!J U:G Wb [cWW][XXVIII] 10.95 61.56; 40.13 21.44 -4.81 0.2 9.05
miRNA 3A6P 4!I:58!J A:U WC [cWW][XX] 11.15 53.06; 44.14 8.92 -13.85 0.1 23.68
miRNA 3A6P 5!I:57!J A:U WC [cWW][XX] 11.11 50.84; 49.22 1.63 -13.7 0.36 17.0
miRNA 3A6P 6!I:56!J A:U WC [cWW][XX] 10.81 46.15; 54.52 8.37 -14.98 0.02 20.71
miRNA 3A6P 7!I:55!J C:G WC [cWW][XIX] 10.89 50.68; 58.62 7.94 -8.0 0.35 18.27
miRNA 3A6P 8!I:54!J A:U WC [cWW][XX] 10.82 54.42; 53.52 0.9 -10.63 0.04 9.94
miRNA 3A6P 9!I:53!J* U:A WC [cWW][XX]; Wb* [---][-] 10.64 49.56; 60.32 10.76 -13.94 0.0 22.71
miRNA 3A6P 10!I:52!J C:G WC [cWW][XIX] 10.92 54.44; 56.91 2.48 -12.54 0.21 21.76
miRNA 3A6P 11!I:51!J C:G WC [cWW][XIX] 11.14 55.94; 56.01 0.07 0.51 0.37 19.9
miRNA 3A6P 14!I:50!J G:C WC [cWW][XIX] 11.82 40.94; 43.21 2.27 -18.93 0.16 25.5
miRNA 3A6P 15!I:49!J A:U WC [cWW][XX] 10.07 58.07; 61.23 3.15 -6.02 0.07 23.53
miRNA 3A6P 16!I:48!J C:G WC [cWW][XIX] 10.48 56.0; 61.14 5.14 -10.74 0.35 30.86
miRNA 3A6P 17!I:47!J U:A WC [cWW][XX] 10.67 50.13; 60.57 10.44 -9.61 0.28 10.33
miRNA 3A6P 18!I:46!J G:C WC_Mo [cWW][XIX] 10.28 64.75; 66.31 1.57 -11.77 0.65 21.61
miRNA 3A6P 19!I:45!J G:U WC [---][-] 10.71 52.01; 61.75 9.74 2.7 0.82 22.89
miRNA 3A6P 20!I:44!J A:U WC [cWW][XX] 10.88 44.34; 52.23 7.88 10.98 0.35 21.23
miRNA 3A6P 21!I:43!J A:U WC [cWW][XX] 10.46 54.98; 54.78 0.2 5.1 0.11 9.95
miRNA 3A6P 22!I:42!J G:C WC [cWW][XIX] 10.86 50.03; 61.09 11.06 -10.8 0.71 24.67
miRNA 3A6P 24!I:40!J U:G Wb [cWW][XXVIII] 10.82 58.84; 44.18 14.66 1.64 0.53 20.37