Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3ADB BPC Identified: 78 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 3ADB 1!C:72!C G:C WC [cWW][XIX] 10.53 55.94; 59.46 3.53 0.7 0.34 10.35
tRNA 3ADB 2!C:71!C G:C WC [cWW][XIX] 10.56 55.35; 57.64 2.28 -1.69 0.23 12.39
tRNA 3ADB 3!C:70!C C:G WC [cWW][XIX] 10.68 53.96; 53.8 0.16 -7.51 0.0 11.41
tRNA 3ADB 4!C:69!C C:G WC [cWW][XIX] 10.69 55.43; 53.68 1.75 -3.98 0.15 5.11
tRNA 3ADB 5!C:68!C G:C WC [cWW][XIX] 10.57 55.61; 55.22 0.39 -4.47 0.12 8.1
tRNA 3ADB 5A!C:67B!C C:G WC [cWW][XIX] 10.6 55.85; 54.26 1.59 -5.34 0.1 9.48
tRNA 3ADB 5B!C:67A!C C:G WC [cWW][XIX] 10.68 55.82; 55.36 0.47 -5.26 0.01 10.25
tRNA 3ADB 6!C:67!C G:C WC [cWW][XIX] 10.75 54.15; 53.25 0.9 -6.61 0.02 8.51
tRNA 3ADB 7!C:66!C C:G WC [cWW][XIX] 10.64 56.27; 54.81 1.46 -1.45 0.21 0.69
tRNA 3ADB 10!C:25!C C:G WC [cWW][XIX] 10.78 53.51; 54.21 0.71 4.66 0.04 3.81
tRNA 3ADB 11!C:24!C C:G WC [cWW][XIX] 10.58 54.81; 56.39 1.58 -2.38 0.48 12.87
tRNA 3ADB 12!C:23!C G:C WC [cWW][XIX] 10.73 54.44; 53.45 0.99 0.33 0.53 15.93
tRNA 3ADB 13!C:22!C G:C WC [cWW][XIX] 10.6 56.0; 55.36 0.63 -2.43 0.21 9.09
tRNA 3ADB 14!C:21!C G:C WC [cWW][XIX] 10.43 56.24; 58.59 2.35 -6.11 0.47 14.67
tRNA 3ADB 15!C:20A!C G:C WC [cWW][XIX] 10.62 54.45; 53.78 0.67 -8.36 0.5 13.5
tRNA 3ADB 16!C:59!C U:U rWb [tWW][XIII] 8.58 45.02; 48.48 3.46 -172.22 0.23 12.04
tRNA 3ADB 18!C:55!C G:U fS_1 [tSW][-] 8.67 27.11; 109.81 82.7 -121.27 0.54 23.25
tRNA 3ADB 19!C:56!C G:C WC [cWW][XIX] 10.54 54.79; 56.02 1.24 -14.52 0.88 23.39
tRNA 3ADB 19!C:20!C G:U pS* [cHS][-] 6.37 135.14; 60.62 74.52 17.14 0.06 13.26
tRNA 3ADB 26!C:44!C G:C WC [cWW][XIX] 10.79 53.59; 52.5 1.09 -4.84 0.16 5.43
tRNA 3ADB 27!C:43!C C:G WC [cWW][XIX] 10.7 54.85; 55.47 0.62 -9.67 0.31 15.24
tRNA 3ADB 28!C:42!C C:G WC [cWW][XIX] 10.71 54.51; 54.95 0.44 -4.53 0.16 8.52
tRNA 3ADB 29!C:41!C G:C WC [cWW][XIX] 10.78 54.14; 53.05 1.09 -5.31 0.06 8.47
tRNA 3ADB 30!C:40!C G:C WC [cWW][XIX] 11.05 48.22; 51.83 3.61 -11.12 0.28 14.38
tRNA 3ADB 31!C:39!C A:U WC [cWW][XX] 10.99 52.9; 52.37 0.54 -10.78 0.22 8.34
tRNA 3ADB 32!C:38!C C:A rH_1 [rWH][XXV] 10.89 28.43; 2.87 25.56 145.27 0.01 4.18
tRNA 3ADB 45!C:48!C G:C WC [cWW][XIX] 10.58 55.51; 57.2 1.7 0.34 0.3 12.0
tRNA 3ADB 46!C:47N!C C:G WC [cWW][XIX] 10.5 55.06; 55.3 0.24 -5.31 0.38 5.75
tRNA 3ADB 47!C:47M!C G:C WC [cWW][XIX] 10.52 55.79; 55.1 0.69 -9.04 0.05 9.88
tRNA 3ADB 47A!C:47L!C C:G WC [cWW][XIX] 10.65 54.82; 54.35 0.47 -8.57 0.04 8.68
tRNA 3ADB 47B!C:47K!C C:G WC [cWW][XIX] 10.76 52.78; 53.38 0.59 -8.02 0.04 9.37
tRNA 3ADB 47C!C:47J!C C:G WC [cWW][XIX] 10.6 55.87; 55.69 0.18 -8.73 0.21 13.79
tRNA 3ADB 47D!C:47I!C C:G WC [cWW][XIX] 10.7 54.97; 54.0 0.96 -1.61 0.42 10.78
tRNA 3ADB 50!C:64!C G:C WC [cWW][XIX] 10.48 53.59; 57.74 4.15 -3.03 0.0 14.37
tRNA 3ADB 51!C:63!C G:C WC [cWW][XIX] 10.55 53.29; 57.14 3.85 3.26 0.04 4.09
tRNA 3ADB 52!C:62!C G:C WC [cWW][XIX] 10.42 57.19; 57.6 0.41 -2.59 0.05 8.93
tRNA 3ADB 53!C:61!C G:C WC [cWW][XIX] 10.52 56.77; 57.28 0.5 -5.2 0.61 16.04
tRNA 3ADB 54!C:58!C U:A rH_1 [tWH][XXIV] 9.42 31.37; 23.74 7.62 165.24 0.2 9.84
tRNA 3ADB 55!C:57!C U:A S(sb:O2*-N7) [---][-] 6.83 78.82; 40.57 38.24 -164.5 1.09 31.13
tRNA 3ADB 1!D:72!D G:C WC [cWW][XIX] 10.57 55.25; 55.67 0.41 -8.84 0.06 11.08
tRNA 3ADB 2!D:71!D G:C WC [cWW][XIX] 10.77 51.87; 51.65 0.22 -12.12 0.05 11.42
tRNA 3ADB 3!D:70!D C:G WC [cWW][XIX] 10.73 54.08; 52.21 1.87 -9.96 0.15 9.33
tRNA 3ADB 4!D:69!D C:G WC [cWW][XIX] 10.79 54.59; 51.93 2.66 -2.86 0.06 4.51
tRNA 3ADB 5!D:68!D G:C WC [cWW][XIX] 10.68 54.48; 56.66 2.18 -0.63 0.02 5.34
tRNA 3ADB 5A!D:67B!D C:G WC [cWW][XIX] 10.48 56.76; 55.15 1.61 -6.83 0.48 13.42
tRNA 3ADB 5B!D:67A!D C:G WC [cWW][XIX] 10.55 54.56; 55.13 0.57 -8.93 0.09 8.82
tRNA 3ADB 6!D:67!D G:C WC [cWW][XIX] 10.58 55.65; 54.16 1.49 -7.76 0.0 10.57
tRNA 3ADB 7!D:66!D C:G WC [cWW][XIX] 10.72 54.19; 52.94 1.25 -1.11 0.17 8.33
tRNA 3ADB 10!D:25!D C:G WC [cWW][XIX] 10.59 57.23; 55.52 1.71 0.89 0.22 2.12
tRNA 3ADB 11!D:24!D C:G WC [cWW][XIX] 10.7 54.53; 54.84 0.31 -0.22 0.09 6.78
tRNA 3ADB 12!D:23!D G:C WC [cWW][XIX] 10.78 53.39; 53.2 0.2 1.83 0.06 5.4
tRNA 3ADB 13!D:22!D G:C WC [cWW][XIX] 10.67 54.13; 54.07 0.06 -5.01 0.27 12.83
tRNA 3ADB 14!D:21!D G:C WC [cWW][XIX] 10.58 56.3; 58.05 1.76 0.56 0.01 5.44
tRNA 3ADB 15!D:20A!D G:C WC [cWW][XIX] 10.67 54.23; 54.88 0.66 -3.89 0.2 13.45
tRNA 3ADB 16!D:59!D U:U rWb [tWW][XIII] 8.53 41.56; 46.09 4.54 -177.57 0.82 18.83
tRNA 3ADB 18!D:55!D G:U fS_1 [tSW][-] 8.51 31.06; 108.37 77.31 -107.39 0.65 32.17
tRNA 3ADB 19!D:56!D G:C WC [cWW][XIX] 10.68 53.58; 51.92 1.66 -16.35 0.95 28.96
tRNA 3ADB 19!D:20!D G:U pS* [cHS][-] 6.12 131.7; 63.38 68.32 20.39 0.48 16.01
tRNA 3ADB 26!D:44!D G:C WC [cWW][XIX] 10.74 53.69; 54.04 0.35 0.52 0.11 4.72
tRNA 3ADB 27!D:43!D C:G WC [cWW][XIX] 10.59 56.66; 57.22 0.56 -4.58 0.27 10.81
tRNA 3ADB 28!D:42!D C:G WC [cWW][XIX] 10.67 54.54; 55.29 0.75 -2.93 0.25 7.84
tRNA 3ADB 29!D:41!D G:C WC [cWW][XIX] 10.66 55.32; 53.78 1.54 -4.86 0.38 12.57
tRNA 3ADB 30!D:40!D G:C WC [cWW][XIX] 10.53 55.86; 56.32 0.46 -4.37 0.07 11.37
tRNA 3ADB 31!D:39!D A:U WC [cWW][XX] 10.54 56.04; 55.58 0.46 -2.04 0.01 2.72
tRNA 3ADB 32!D:38!D C:A rWb* [tWW][XXVI] 11.81 40.78; 19.75 21.03 111.55 0.14 34.59
tRNA 3ADB 45!D:48!D G:C WC [cWW][XIX] 10.61 52.76; 56.57 3.81 9.11 0.36 18.01
tRNA 3ADB 46!D:47N!D C:G WC [cWW][XIX] 10.49 57.71; 55.93 1.78 -3.52 0.06 7.9
tRNA 3ADB 47!D:47M!D G:C WC [cWW][XIX] 10.73 53.85; 54.14 0.3 -3.34 0.11 5.7
tRNA 3ADB 47A!D:47L!D C:G WC [cWW][XIX] 10.58 57.46; 54.08 3.38 -4.25 0.25 10.59
tRNA 3ADB 47B!D:47K!D C:G WC [cWW][XIX] 10.62 57.86; 54.81 3.05 -0.66 0.06 5.79
tRNA 3ADB 47C!D:47J!D C:G WC [cWW][XIX] 10.62 54.6; 54.68 0.08 8.1 0.12 5.64
tRNA 3ADB 47D!D:47I!D C:G WC [cWW][XIX] 10.79 54.93; 56.26 1.34 9.42 0.22 10.75
tRNA 3ADB 50!D:64!D G:C WC [cWW][XIX] 10.47 56.2; 58.75 2.54 -4.22 0.18 12.12
tRNA 3ADB 51!D:63!D G:C WC [cWW][XIX] 10.46 56.32; 58.39 2.07 1.25 0.1 5.12
tRNA 3ADB 52!D:62!D G:C WC [cWW][XIX] 10.59 55.57; 55.07 0.5 -1.66 0.1 10.79
tRNA 3ADB 53!D:61!D G:C WC [cWW][XIX] 10.61 56.35; 54.57 1.79 -3.93 0.35 11.89
tRNA 3ADB 54!D:58!D U:A rH_1 [tWH][XXIV] 9.79 33.94; 17.39 16.55 -177.96 0.23 7.79
tRNA 3ADB 55!D:57!D U:A S(sb:O2*-N7) [---][-] 6.55 87.22; 37.6 49.62 -156.36 0.33 40.41