Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3AGV BPC Identified: 19 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
RNA_aptamer 3AGV 1!S:23!S G:C WC [cWW][XIX] 10.15 55.44; 56.06 0.62 -6.19 1.27 34.45
RNA_aptamer 3AGV 2!S:22!S G:C WC [cWW][XIX] 11.22 50.87; 55.82 4.94 12.15 0.44 13.22
RNA_aptamer 3AGV 3!S:21!S A:U WC [cWW][XX] 10.3 65.66; 60.01 5.65 0.06 1.08 23.58
RNA_aptamer 3AGV 4!S:20!S G:C WC [cWW][XIX] 10.37 55.57; 56.75 1.18 -3.82 0.1 19.23
RNA_aptamer 3AGV 5!S:19!S G:A S [tSH][XI] 9.4 94.4; 9.4 85.01 26.01 0.36 19.76
RNA_aptamer 3AGV 5!S:18!S G:A S(bp:N1-O2P)_2 [---][-] 11.22 72.85; 42.32 30.53 140.52 1.82 25.26
RNA_aptamer 3AGV 6!S:18!S U:A rH_1 [tWH][XXIV] 9.24 39.38; 18.43 20.95 140.58 0.26 20.61
RNA_aptamer 3AGV 9!S:18!S U:A WC [cWW][XX] 10.37 52.25; 54.3 2.05 -10.47 0.81 21.49
RNA_aptamer 3AGV 10!S:17!S C:G WC [cWW][XIX] 10.76 55.23; 50.22 5.0 -10.51 0.63 17.32
RNA_aptamer 3AGV 11!S:16!S C:G WC [cWW][XIX] 10.48 53.85; 45.55 8.3 10.22 0.45 40.44
RNA_aptamer 3AGV 2!U:24!U G:A S [tSH][XI] 10.79 83.21; 20.48 62.73 -101.56 0.59 53.5
RNA_aptamer 3AGV 3!U:21!U A:U WC [cWW][XX] 10.62 53.7; 57.27 3.58 2.64 0.08 5.49
RNA_aptamer 3AGV 4!U:20!U G:C WC [cWW][XIX] 10.1 52.62; 59.11 6.5 -1.01 0.64 12.13
RNA_aptamer 3AGV 5!U:19!U G:A S [tSH][XI] 9.56 100.53; 8.72 91.81 18.28 0.61 21.9
RNA_aptamer 3AGV 5!U:18!U G:A S(bp:N1-O2P)_2 [---][-] 11.48 75.41; 42.85 32.56 127.25 2.4 29.87
RNA_aptamer 3AGV 6!U:18!U U:A rH_1 [tWH][XXIV] 9.99 39.99; 16.4 23.59 154.57 0.1 9.71
RNA_aptamer 3AGV 9!U:18!U U:A WC [cWW][XX] 10.58 52.6; 58.47 5.87 -12.45 0.62 23.04
RNA_aptamer 3AGV 10!U:17!U C:G WC [cWW][XIX] 10.84 56.47; 53.01 3.46 -10.76 0.12 19.12
RNA_aptamer 3AGV 11!U:16!U C:G WC [cWW][XIX] 10.96 56.69; 50.85 5.84 4.31 0.41 10.82