Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3AL0 BPC Identified: 34 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 3AL0 1!E:72!E U:A WC [cWW][XX] 10.73 50.18; 60.41 10.23 -18.64 0.21 36.88
tRNA 3AL0 2!E:71!E G:C WC [cWW][XIX] 10.74 52.97; 54.08 1.11 -11.59 0.33 22.05
tRNA 3AL0 3!E:70!E G:C WC [cWW][XIX] 10.14 59.18; 62.96 3.78 -14.16 0.44 33.3
tRNA 3AL0 4!E:69!E G:C WC [cWW][XIX] 10.63 54.23; 53.63 0.6 -11.94 0.25 14.24
tRNA 3AL0 5!E:68!E A:U WC [cWW][XX] 10.52 60.41; 52.99 7.42 -15.74 0.06 15.42
tRNA 3AL0 6!E:67!E G:C WC [cWW][XIX] 10.88 53.43; 54.71 1.29 -4.96 0.31 11.45
tRNA 3AL0 7!E:66!E G:C WC [cWW][XIX] 10.74 49.34; 53.28 3.94 8.28 0.11 8.8
tRNA 3AL0 8!E:46!E U:G rpS [cSS][-] 5.76 134.75; 96.24 38.52 -66.49 2.29 12.2
tRNA 3AL0 8!E:21!E U:A fS(sb:O2*-N1) [tSW][-] 8.2 98.15; 60.69 37.46 168.84 0.23 14.93
tRNA 3AL0 8!E:14!E U:A rH_1 [tWH][XXIV] 9.5 34.59; 18.61 15.99 163.9 0.22 5.97
tRNA 3AL0 10!E:25!E G:C WC [cWW][XIX] 10.68 51.95; 55.82 3.88 -5.26 0.13 8.77
tRNA 3AL0 11!E:24!E U:A WC [cWW][XX] 10.19 58.88; 59.62 0.74 -12.65 0.1 17.02
tRNA 3AL0 12!E:23!E C:G WC [cWW][XIX] 10.84 49.77; 51.83 2.06 -10.64 0.0 12.89
tRNA 3AL0 13!E:22!E U:G Wb [cWW][XXVIII] 10.44 74.78; 38.18 36.6 -10.17 0.62 13.61
tRNA 3AL0 14!E:21!E A:A pfS [cSW][-] 9.41 34.69; 123.78 89.09 -3.17 0.21 9.34
tRNA 3AL0 15!E:48!E A:U rWC [tWW][XXI] 11.49 31.77; 36.83 5.06 173.94 0.04 4.41
tRNA 3AL0 18!E:55!E G:U fS_1 [tSW][-] 8.78 32.59; 107.24 74.64 -131.45 0.84 21.47
tRNA 3AL0 19!E:56!E G:C WC [cWW][XIX] 10.48 52.59; 59.72 7.13 -13.83 0.72 24.45
tRNA 3AL0 22!E:46!E G:G rH_1 [tWH][VII] 11.2 33.7; 28.86 4.83 -162.29 0.01 17.13
tRNA 3AL0 26!E:44!E G:U Wb_mo [cWW][XXVIII] 11.85 28.83; 52.28 23.45 -2.63 0.24 29.36
tRNA 3AL0 27!E:43!E G:C WC [cWW][XIX] 10.85 51.57; 49.04 2.53 -16.22 0.11 25.86
tRNA 3AL0 28!E:42!E C:G WC [cWW][XIX] 10.87 52.66; 53.26 0.59 -15.01 0.06 23.34
tRNA 3AL0 29!E:41!E G:C WC [cWW][XIX] 10.49 55.83; 62.06 6.24 -13.75 0.24 14.34
tRNA 3AL0 30!E:40!E G:C WC [cWW][XIX] 10.58 54.18; 55.82 1.64 -14.53 0.34 12.99
tRNA 3AL0 31!E:39!E A:U WC [cWW][XX] 10.23 60.11; 56.62 3.49 -17.37 0.37 25.5
tRNA 3AL0 32!E:38!E C:A Wb [cWW][-] 10.97 58.42; 37.87 20.55 -12.89 0.13 10.64
tRNA 3AL0 32!E:36!E C:G rH_1 [tWH][-] 10.97 25.53; 27.08 1.55 108.47 2.14 24.36
tRNA 3AL0 49!E:65!E G:C WC [cWW][XIX] 10.54 52.13; 58.28 6.14 -4.7 0.37 17.38
tRNA 3AL0 50!E:64!E G:C WC [cWW][XIX] 10.7 53.9; 54.01 0.1 1.73 0.4 11.1
tRNA 3AL0 51!E:63!E A:U WC [cWW][XX] 11.07 51.68; 48.13 3.55 1.92 0.28 18.62
tRNA 3AL0 52!E:62!E G:C WC [cWW][XIX] 10.72 56.49; 53.9 2.58 -2.96 0.22 5.72
tRNA 3AL0 53!E:61!E G:C WC [cWW][XIX] 10.51 56.59; 55.03 1.56 0.28 0.67 11.44
tRNA 3AL0 54!E:58!E U:A rH_1 [tWH][XXIV] 9.7 29.93; 19.66 10.27 176.81 0.03 12.6
tRNA 3AL0 55!E:57!E U:G S(sb:O2*-N7)_1 [---][-] 6.92 76.32; 41.72 34.6 -170.44 0.22 39.37