Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3B58 BPC Identified: 29 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HP_ribozyme 3B58 2!A:13!B C:G WC [cWW][XIX] 10.42 55.11; 56.18 1.07 -10.33 0.06 20.86
HP_ribozyme 3B58 3!A:12!B C:G WC [cWW][XIX] 10.55 56.3; 52.39 3.91 -8.78 0.12 10.69
HP_ribozyme 3B58 4!A:11!B C:G WC [cWW][XIX] 10.47 61.06; 53.41 7.65 -1.46 0.29 1.93
HP_ribozyme 3B58 5!A:9!B A:A S [tSH][-] 10.4 78.74; 5.17 73.57 -74.21 0.1 10.72
HP_ribozyme 3B58 6!A:25!B G:C WC [cWW][XIX] 10.39 55.27; 54.95 0.32 -10.6 0.66 19.6
HP_ribozyme 3B58 7!A:8!B U:G S*_1 [tHS][-] 11.29 5.94; 89.87 83.93 80.56 0.7 15.68
HP_ribozyme 3B58 8!A:7!B C:A Wb* [cWW][-] 11.36 42.71; 70.81 28.11 0.27 0.21 30.18
HP_ribozyme 3B58 9!A:6!B C:G WC [cWW][XIX] 10.71 55.5; 57.13 1.62 -3.5 0.1 5.51
HP_ribozyme 3B58 10!A:5!B A:U WC [cWW][XX] 10.71 55.25; 51.21 4.04 -11.05 0.37 16.27
HP_ribozyme 3B58 11!A:4!B C:G WC [cWW][XIX] 10.45 56.65; 58.35 1.7 -5.59 0.43 16.33
HP_ribozyme 3B58 12!A:3!B C:G WC [cWW][XIX] 10.31 57.38; 53.49 3.89 -10.9 0.02 14.46
HP_ribozyme 3B58 13!A:2!B G:C WC [cWW][XIX] 10.34 59.98; 59.28 0.71 -5.41 0.04 7.88
HP_ribozyme 3B58 10!B:25!B A:C rpS(sb:O2*-N3) [cSS][-] 5.32 96.02; 152.43 56.41 -70.97 0.69 42.63
HP_ribozyme 3B58 11!B:24!B G:A rpS(sb:O2*-N3) [---][-] 5.3 150.15; 95.7 54.44 -76.22 1.39 46.13
HP_ribozyme 3B58 15!B:49!C G:C WC [cWW][XIX] 10.66 52.9; 55.56 2.66 -8.27 0.47 4.46
HP_ribozyme 3B58 16!B:48!C G:C WC [cWW][XIX] 10.62 53.17; 54.05 0.89 -8.42 0.31 12.95
HP_ribozyme 3B58 17!B:47!C C:G WC [cWW][XIX] 10.62 53.08; 58.21 5.13 -6.45 0.43 16.72
HP_ribozyme 3B58 18!B:46!C A:U WC [cWW][XX] 10.26 55.69; 59.88 4.19 -7.79 0.13 10.67
HP_ribozyme 3B58 19!B:45!C G:C WC [cWW][XIX] 10.24 56.09; 58.11 2.02 -0.09 0.01 16.54
HP_ribozyme 3B58 20!B:44!C A:C Wb* [cWW][-] 10.49 75.83; 50.3 25.52 -1.76 0.3 15.77
HP_ribozyme 3B58 21!B:43!C G:A S [tSH][XI] 9.43 98.88; 3.33 95.54 47.43 0.12 5.24
HP_ribozyme 3B58 22!B:41!C A:U rH_1 [tWH][XXIV] 9.64 19.99; 32.45 12.46 -164.53 0.5 12.92
HP_ribozyme 3B58 23!B:40!C A:A rH [tWH][V] 12.61 12.75; 29.13 16.38 171.94 0.15 14.43
HP_ribozyme 3B58 26!B:36!C A:G rWb* [---][-] 12.47 47.66; 44.44 3.22 -5.94 0.48 16.32
HP_ribozyme 3B58 27!B:35!C C:G WC [cWW][XIX] 10.47 52.66; 52.86 0.2 -20.05 0.75 26.59
HP_ribozyme 3B58 28!B:34!C A:U WC [cWW][XX] 10.32 54.41; 53.25 1.16 -20.66 0.05 23.19
HP_ribozyme 3B58 29!B:33!C C:G WC [cWW][XIX] 10.5 55.79; 53.51 2.28 -10.93 0.39 13.86
HP_ribozyme 3B58 30!B:32!C G:C WC [cWW][XIX] 10.82 52.48; 52.34 0.15 -10.04 0.27 9.66
HP_ribozyme 3B58 31!B:31!C A:U WC [cWW][XX] 10.67 57.69; 52.25 5.44 0.77 0.03 4.36