Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3BBI BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HP_Ribozyme 3BBI 2!A:13!B C:G WC [cWW][XIX] 10.51 55.89; 56.8 0.91 -9.0 0.17 21.86
HP_Ribozyme 3BBI 3!A:12!B C:G WC [cWW][XIX] 10.69 55.19; 54.04 1.15 -7.08 0.18 8.78
HP_Ribozyme 3BBI 4!A:11!B C:G WC [cWW][XIX] 10.47 61.0; 54.45 6.55 1.89 0.14 4.85
HP_Ribozyme 3BBI 5!A:9!B A:A S [tSH][-] 10.06 85.79; 7.75 78.05 -89.79 0.44 18.76
HP_Ribozyme 3BBI 6!A:25!B G:C WC [cWW][XIX] 10.48 49.38; 54.3 4.92 -16.31 0.29 27.14
HP_Ribozyme 3BBI 7!A:8!B U:G S*_1 [tHS][-] 11.0 13.07; 99.89 86.82 32.13 0.26 14.96
HP_Ribozyme 3BBI 8!A:7!B C:A Wb* [cWW][-] 11.08 45.57; 68.67 23.09 -2.32 0.03 26.18
HP_Ribozyme 3BBI 9!A:6!B C:G WC [cWW][XIX] 10.68 55.14; 56.12 0.98 -3.56 0.24 16.82
HP_Ribozyme 3BBI 10!A:5!B A:U WC [cWW][XX] 10.75 57.98; 51.86 6.12 -7.86 0.28 9.99
HP_Ribozyme 3BBI 11!A:4!B C:G WC [cWW][XIX] 10.5 56.89; 58.09 1.2 -5.43 0.2 11.09
HP_Ribozyme 3BBI 12!A:3!B C:G WC [cWW][XIX] 10.35 55.33; 58.46 3.13 -7.55 0.2 14.56
HP_Ribozyme 3BBI 13!A:2!B G:C WC [cWW][XIX] 10.51 58.74; 57.06 1.68 -6.95 0.12 10.68
HP_Ribozyme 3BBI 10!B:25!B A:C rpS(sb:O2*-N3) [cSS][-] 5.41 94.25; 150.59 56.34 -71.31 0.4 44.73
HP_Ribozyme 3BBI 11!B:24!B G:A rpS(sb:O2*-N3) [---][-] 5.28 151.65; 93.68 57.97 -75.02 1.21 44.62
HP_Ribozyme 3BBI 15!B:49!C G:C WC [cWW][XIX] 10.57 53.62; 57.28 3.65 -11.35 0.29 11.71
HP_Ribozyme 3BBI 16!B:48!C G:C WC [cWW][XIX] 10.64 51.77; 56.39 4.61 -11.56 0.2 17.23
HP_Ribozyme 3BBI 17!B:47!C C:G WC [cWW][XIX] 10.55 55.83; 55.21 0.63 -8.1 0.43 17.46
HP_Ribozyme 3BBI 18!B:46!C A:U WC [cWW][XX] 10.23 59.39; 60.39 1.0 -7.23 0.03 12.77
HP_Ribozyme 3BBI 19!B:45!C G:C WC [cWW][XIX] 10.36 55.82; 58.15 2.34 -0.79 0.12 13.94
HP_Ribozyme 3BBI 20!B:44!C A:C Wb* [cWW][-] 10.24 78.58; 49.07 29.51 -0.91 0.28 14.45
HP_Ribozyme 3BBI 21!B:43!C G:A S [tSH][XI] 9.46 99.23; 2.91 96.31 41.92 0.02 7.3
HP_Ribozyme 3BBI 22!B:41!C A:U rH_1 [tWH][XXIV] 9.67 22.63; 26.32 3.7 -167.58 0.44 10.7
HP_Ribozyme 3BBI 23!B:40!C A:A rH [tWH][V] 12.72 10.72; 27.0 16.28 176.38 0.61 19.09
HP_Ribozyme 3BBI 26!B:36!C A:G WC [cWW][VIII] 12.74 45.3; 46.22 0.92 -11.34 0.08 20.95
HP_Ribozyme 3BBI 27!B:36!C C:G WC_Mo [cWW][XIX] 10.13 73.64; 59.91 13.72 -21.36 2.19 14.51
HP_Ribozyme 3BBI 27!B:35!C C:G WC [cWW][XIX] 10.73 51.88; 53.05 1.18 -19.44 0.25 23.02
HP_Ribozyme 3BBI 28!B:34!C A:U WC [cWW][XX] 10.47 54.46; 55.81 1.35 -19.82 0.07 22.19
HP_Ribozyme 3BBI 29!B:33!C C:G WC [cWW][XIX] 10.49 56.65; 53.74 2.91 -14.41 0.39 16.55
HP_Ribozyme 3BBI 30!B:32!C G:C WC [cWW][XIX] 10.79 53.31; 52.51 0.79 -12.93 0.27 18.56
HP_Ribozyme 3BBI 31!B:31!C A:U WC [cWW][XX] 10.53 59.06; 52.96 6.09 -3.59 0.08 8.94