Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3BBV
BPC Identified: 24
Ambiguities: 0
| tRNA |
3BBV |
1!z:72!z |
G:C |
WC [cWW][XIX] |
10.93 |
52.59; 44.59 |
8.0 |
-0.23 |
0.1 |
2.62 |
| tRNA |
3BBV |
2!z:71!z |
C:G |
WC [cWW][XIX] |
10.48 |
55.61; 54.76 |
0.86 |
3.53 |
0.07 |
6.67 |
| tRNA |
3BBV |
3!z:70!z |
C:G |
WC [cWW][XIX] |
10.52 |
57.23; 48.63 |
8.59 |
4.74 |
0.09 |
5.46 |
| tRNA |
3BBV |
4!z:69!z |
C:G |
WC [cWW][XIX] |
10.51 |
60.17; 52.32 |
7.85 |
6.74 |
0.03 |
5.52 |
| tRNA |
3BBV |
5!z:68!z |
G:C |
WC_Mo [cWW][XIX] |
10.08 |
65.07; 68.06 |
2.99 |
-9.62 |
0.29 |
12.91 |
| tRNA |
3BBV |
6!z:67!z |
G:C |
WC [cWW][XIX] |
10.58 |
58.76; 57.57 |
1.19 |
-10.59 |
0.08 |
14.14 |
| tRNA |
3BBV |
7!z:66!z |
A:U |
WC [cWW][XX] |
10.58 |
59.04; 48.53 |
10.52 |
-4.92 |
0.18 |
6.09 |
| tRNA |
3BBV |
10!z:25!z |
G:C |
Wb [---][-] |
9.62 |
55.86; 77.05 |
21.18 |
-5.88 |
0.56 |
16.86 |
| tRNA |
3BBV |
11!z:24!z |
C:G |
Wb [---][-] |
10.68 |
64.26; 53.18 |
11.08 |
-7.97 |
0.42 |
15.1 |
| tRNA |
3BBV |
12!z:23!z |
U:A |
WC [cWW][XX] |
11.91 |
42.66; 47.72 |
5.05 |
-7.97 |
0.82 |
17.99 |
| tRNA |
3BBV |
13!z:22!z |
C:G |
WC [cWW][XIX] |
10.66 |
58.06; 48.42 |
9.64 |
-3.97 |
0.13 |
11.09 |
| tRNA |
3BBV |
15!z:48!z |
G:C |
rWb [tWW][XXII] |
11.3 |
26.73; 58.73 |
32.0 |
-150.7 |
0.31 |
20.17 |
| tRNA |
3BBV |
26!z:44!z |
A:G |
WC [cWW][VIII] |
13.12 |
44.86; 44.08 |
0.78 |
-30.7 |
0.69 |
35.93 |
| tRNA |
3BBV |
27!z:43!z |
G:C |
WC [cWW][XIX] |
11.37 |
53.98; 50.46 |
3.52 |
-18.2 |
0.86 |
12.18 |
| tRNA |
3BBV |
28!z:42!z |
G:C |
WC [cWW][XIX] |
10.32 |
49.12; 57.91 |
8.79 |
-11.18 |
0.02 |
16.52 |
| tRNA |
3BBV |
29!z:41!z |
G:C |
WC [cWW][XIX] |
10.07 |
62.14; 65.72 |
3.58 |
1.18 |
0.5 |
17.1 |
| tRNA |
3BBV |
30!z:40!z |
G:C |
WC [cWW][XIX] |
10.72 |
52.23; 44.01 |
8.23 |
10.72 |
0.48 |
4.4 |
| tRNA |
3BBV |
31!z:39!z |
A:U |
Wb*_PSU [---][-] |
10.26 |
67.41; 59.99 |
7.42 |
9.73 |
0.68 |
19.88 |
| tRNA |
3BBV |
33!z:35!z |
U:A |
S(sb:O2*-N7) [---][-] |
6.33 |
84.75; 44.18 |
40.57 |
-172.89 |
1.26 |
26.09 |
| tRNA |
3BBV |
49!z:65!z |
C:G |
WC [cWW][XIX] |
11.24 |
45.02; 39.87 |
5.15 |
10.65 |
0.49 |
4.27 |
| tRNA |
3BBV |
51!z:63!z |
U:G |
Wb [cWW][XXVIII] |
10.48 |
71.9; 40.46 |
31.45 |
6.08 |
0.12 |
9.73 |
| tRNA |
3BBV |
52!z:62!z |
G:C |
WC [cWW][XIX] |
9.74 |
66.99; 64.55 |
2.45 |
-11.7 |
0.23 |
12.21 |
| tRNA |
3BBV |
53!z:61!z |
G:C |
WC [cWW][XIX] |
10.45 |
60.11; 56.57 |
3.53 |
10.43 |
0.4 |
7.2 |
| tRNA |
3BBV |
54!z:58!z |
U:A |
rH_1 [tWH][XXIV] |
8.82 |
47.4; 25.23 |
22.17 |
151.32 |
0.35 |
12.13 |