Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3BNT
BPC Identified: 20
Ambiguities: 0
rRNA |
3BNT |
2!A:22!B |
G:C |
WC [cWW][XIX] |
10.46 |
56.17; 56.6 |
0.43 |
-7.85 |
0.21 |
7.87 |
rRNA |
3BNT |
3!A:21!B |
C:G |
WC [cWW][XIX] |
10.44 |
55.53; 54.45 |
1.08 |
-10.55 |
0.11 |
11.82 |
rRNA |
3BNT |
4!A:20!B |
G:C |
WC [cWW][XIX] |
10.59 |
56.58; 58.4 |
1.82 |
-9.57 |
0.04 |
15.63 |
rRNA |
3BNT |
5!A:19!B |
U:U |
Wb [cWW][XVI] |
8.92 |
74.13; 40.3 |
33.84 |
-15.58 |
0.04 |
22.74 |
rRNA |
3BNT |
6!A:18!B |
C:G |
WC [cWW][XIX] |
10.4 |
55.7; 53.68 |
2.03 |
-11.19 |
0.62 |
20.55 |
rRNA |
3BNT |
7!A:17!B |
A:A |
Wb [cWW][-] |
12.77 |
56.89; 35.87 |
21.01 |
14.36 |
1.11 |
24.31 |
rRNA |
3BNT |
8!A:15!B |
C:C |
sWb [---][-] |
9.79 |
29.15; 84.84 |
55.68 |
-11.87 |
0.36 |
13.35 |
rRNA |
3BNT |
9!A:14!B |
C:G |
WC [cWW][XIX] |
10.42 |
57.24; 56.42 |
0.82 |
-9.08 |
0.04 |
11.33 |
rRNA |
3BNT |
10!A:13!B |
U:A |
WC [cWW][XX] |
10.31 |
53.46; 58.83 |
5.37 |
-13.37 |
0.11 |
13.21 |
rRNA |
3BNT |
11!A:12!B |
C:G |
WC [cWW][XIX] |
10.43 |
56.05; 55.94 |
0.11 |
-10.86 |
0.04 |
22.54 |
rRNA |
3BNT |
12!A:11!B |
G:C |
WC [cWW][XIX] |
10.43 |
55.94; 56.05 |
0.11 |
-10.86 |
0.04 |
22.55 |
rRNA |
3BNT |
13!A:10!B |
A:U |
WC [cWW][XX] |
10.31 |
58.83; 53.45 |
5.38 |
-13.34 |
0.11 |
13.23 |
rRNA |
3BNT |
14!A:9!B |
G:C |
WC [cWW][XIX] |
10.42 |
56.42; 57.23 |
0.81 |
-9.09 |
0.04 |
11.33 |
rRNA |
3BNT |
15!A:8!B |
C:C |
sWb [---][-] |
9.79 |
84.84; 29.17 |
55.67 |
-11.78 |
0.36 |
13.35 |
rRNA |
3BNT |
17!A:7!B |
A:A |
Wb [cWW][-] |
12.77 |
35.87; 56.89 |
21.01 |
14.32 |
1.11 |
24.29 |
rRNA |
3BNT |
18!A:6!B |
G:C |
WC [cWW][XIX] |
10.4 |
53.67; 55.7 |
2.03 |
-11.19 |
0.62 |
20.57 |
rRNA |
3BNT |
19!A:5!B |
U:U |
Wb [cWW][XVI] |
8.92 |
40.29; 74.13 |
33.84 |
-15.61 |
0.04 |
22.73 |
rRNA |
3BNT |
20!A:4!B |
C:G |
WC [cWW][XIX] |
10.59 |
58.39; 56.58 |
1.82 |
-9.53 |
0.04 |
15.66 |
rRNA |
3BNT |
21!A:3!B |
G:C |
WC [cWW][XIX] |
10.44 |
54.44; 55.55 |
1.11 |
-10.55 |
0.11 |
11.85 |
rRNA |
3BNT |
22!A:2!B |
C:G |
WC [cWW][XIX] |
10.46 |
56.6; 56.17 |
0.43 |
-7.85 |
0.21 |
7.88 |