Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3C5D BPC Identified: 21 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
vRNA 3C5D 1!A:23!B C:G WC [cWW][XIX] 10.7 50.65; 52.42 1.76 -15.54 0.36 21.95
vRNA 3C5D 2!A:22!B U:A WC [cWW][XX] 10.41 55.04; 57.38 2.34 -15.14 0.09 17.54
vRNA 3C5D 3!A:21!B U:A WC [cWW][XX] 10.25 59.08; 56.45 2.64 -10.72 0.4 13.24
vRNA 3C5D 4!A:20!B G:C WC [cWW][XIX] 10.56 55.93; 53.79 2.14 -13.44 0.11 18.08
vRNA 3C5D 5!A:19!B C:G WC [cWW][XIX] 10.58 56.12; 54.56 1.56 -10.72 0.01 14.78
vRNA 3C5D 6!A:18!B U:A WC [cWW][XX] 10.34 56.38; 57.76 1.38 -12.54 0.13 14.3
vRNA 3C5D 7!A:17!B G:C WC [cWW][XIX] 10.53 55.23; 55.64 0.41 -18.68 0.37 30.6
vRNA 3C5D 8!A:10!B A:G rpS(ps:O1P-O2*) [---][-] 10.58 115.96; 108.0 7.95 90.89 1.41 88.34
vRNA 3C5D 10!A:15!B G:C WC [cWW][XIX] 10.68 51.14; 55.23 4.09 0.55 0.34 7.45
vRNA 3C5D 11!A:14!B U:A WC [cWW][XX] 10.56 53.2; 58.69 5.49 -5.84 0.07 8.33
vRNA 3C5D 12!A:13!B G:C WC [cWW][XIX] 10.65 53.69; 52.82 0.87 -5.11 0.12 9.79
vRNA 3C5D 13!A:12!B C:G WC [cWW][XIX] 10.44 56.91; 55.52 1.39 -10.41 0.02 13.8
vRNA 3C5D 14!A:11!B A:U WC [cWW][XX] 10.39 57.42; 55.2 2.22 -5.87 0.03 12.01
vRNA 3C5D 15!A:10!B C:G WC [cWW][XIX] 10.61 57.67; 53.42 4.24 -3.28 0.1 9.03
vRNA 3C5D 17!A:7!B C:G WC [cWW][XIX] 10.41 55.93; 54.11 1.82 -11.46 0.29 20.68
vRNA 3C5D 18!A:6!B A:U WC [cWW][XX] 10.17 59.03; 59.61 0.58 -14.17 0.1 19.38
vRNA 3C5D 19!A:5!B G:C WC [cWW][XIX] 10.56 54.01; 56.1 2.09 -8.86 0.06 13.87
vRNA 3C5D 20!A:4!B C:G WC [cWW][XIX] 10.57 56.44; 55.57 0.87 -6.72 0.1 12.27
vRNA 3C5D 21!A:3!B A:U WC [cWW][XX] 10.4 55.99; 55.75 0.23 -7.49 0.39 11.41
vRNA 3C5D 22!A:2!B A:U WC [cWW][XX] 10.27 56.65; 53.83 2.82 -12.9 0.13 14.39
vRNA 3C5D 23!A:1!B G:C WC [cWW][XIX] 10.43 54.79; 54.18 0.62 -11.89 0.1 20.84