Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3CGP
BPC Identified: 11
Ambiguities: 0
| snoRNA |
3CGP |
2!A:25!B |
C:G |
WC [cWW][XIX] |
10.73 |
53.38; 55.08 |
1.7 |
-3.68 |
0.34 |
9.75 |
| snoRNA |
3CGP |
3!A:24!B |
G:C |
WC [cWW][XIX] |
10.55 |
54.03; 57.43 |
3.39 |
-10.71 |
0.02 |
13.94 |
| snoRNA |
3CGP |
4!A:23!B |
C:G |
WC [cWW][XIX] |
10.65 |
54.87; 55.02 |
0.15 |
-6.29 |
0.07 |
11.4 |
| snoRNA |
3CGP |
5!A:22!B |
G:C |
WC [cWW][XIX] |
10.56 |
55.1; 57.31 |
2.21 |
-10.99 |
0.29 |
17.32 |
| snoRNA |
3CGP |
6!A:21!B |
U:A |
WC_PSU [---][-] |
10.68 |
71.71; 55.09 |
16.62 |
-6.3 |
0.14 |
9.72 |
| snoRNA |
3CGP |
7!A:19!B |
A:U |
WC [cWW][XX] |
10.63 |
54.39; 53.13 |
1.26 |
-11.16 |
0.19 |
12.22 |
| snoRNA |
3CGP |
8!A:18!B |
G:C |
WC [cWW][XIX] |
10.59 |
53.37; 54.63 |
1.26 |
-15.12 |
0.48 |
24.19 |
| snoRNA |
3CGP |
9!A:17!B |
U:A |
WC [cWW][XX] |
10.54 |
56.15; 53.52 |
2.63 |
-12.11 |
0.25 |
16.81 |
| snoRNA |
3CGP |
10!A:16!B |
A:U |
WC [cWW][XX] |
10.61 |
56.04; 53.73 |
2.31 |
-6.29 |
0.01 |
7.27 |
| snoRNA |
3CGP |
11!A:15!B |
G:C |
WC [cWW][XIX] |
10.52 |
55.79; 56.5 |
0.71 |
-10.94 |
0.01 |
14.91 |
| snoRNA |
3CGP |
12!A:14!B |
C:G |
WC [cWW][XIX] |
10.69 |
56.3; 53.14 |
3.16 |
-9.27 |
0.08 |
11.84 |