Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3CGQ
BPC Identified: 11
Ambiguities: 0
| snoRNA |
3CGQ |
2!A:25!B |
C:G |
WC [cWW][XIX] |
10.79 |
52.06; 58.79 |
6.73 |
-9.11 |
0.22 |
12.84 |
| snoRNA |
3CGQ |
3!A:24!B |
G:C |
WC [cWW][XIX] |
10.52 |
53.53; 55.79 |
2.26 |
-11.79 |
0.01 |
15.56 |
| snoRNA |
3CGQ |
4!A:23!B |
C:G |
WC [cWW][XIX] |
10.62 |
54.11; 54.33 |
0.22 |
-7.12 |
0.01 |
13.1 |
| snoRNA |
3CGQ |
5!A:22!B |
G:C |
WC [cWW][XIX] |
10.44 |
57.37; 56.89 |
0.48 |
-10.68 |
0.14 |
16.8 |
| snoRNA |
3CGQ |
6!A:21!B |
U:A |
WC_PSU [---][-] |
10.28 |
71.32; 59.95 |
11.37 |
-5.83 |
0.02 |
8.22 |
| snoRNA |
3CGQ |
7!A:19!B |
A:U |
WC [cWW][XX] |
10.63 |
57.2; 53.61 |
3.6 |
-10.79 |
0.0 |
10.93 |
| snoRNA |
3CGQ |
8!A:18!B |
G:C |
WC [cWW][XIX] |
10.78 |
54.03; 52.59 |
1.43 |
-13.19 |
0.0 |
27.97 |
| snoRNA |
3CGQ |
9!A:17!B |
U:A |
WC [cWW][XX] |
10.46 |
56.88; 54.21 |
2.66 |
-13.72 |
0.01 |
20.6 |
| snoRNA |
3CGQ |
10!A:16!B |
A:U |
WC [cWW][XX] |
10.52 |
56.24; 56.1 |
0.13 |
-6.96 |
0.15 |
5.89 |
| snoRNA |
3CGQ |
11!A:15!B |
G:C |
WC [cWW][XIX] |
10.65 |
58.96; 55.28 |
3.68 |
-8.53 |
0.03 |
13.35 |
| snoRNA |
3CGQ |
12!A:14!B |
C:G |
WC [cWW][XIX] |
10.72 |
55.34; 53.91 |
1.42 |
-9.9 |
0.09 |
11.73 |