Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3CGR
BPC Identified: 11
Ambiguities: 0
| snoRNA |
3CGR |
2!A:25!B |
C:G |
WC [cWW][XIX] |
10.7 |
52.92; 54.6 |
1.68 |
-0.8 |
0.01 |
4.74 |
| snoRNA |
3CGR |
3!A:24!B |
G:C |
WC [cWW][XIX] |
10.48 |
53.59; 55.37 |
1.78 |
-4.59 |
0.22 |
9.65 |
| snoRNA |
3CGR |
4!A:23!B |
C:G |
WC [cWW][XIX] |
10.56 |
54.84; 54.93 |
0.08 |
-4.04 |
0.13 |
11.68 |
| snoRNA |
3CGR |
5!A:22!B |
G:C |
WC [cWW][XIX] |
10.5 |
56.81; 58.11 |
1.3 |
-10.19 |
0.16 |
14.96 |
| snoRNA |
3CGR |
6!A:21!B |
G:C |
WC [cWW][XIX] |
10.72 |
50.56; 52.12 |
1.56 |
-8.51 |
0.15 |
14.79 |
| snoRNA |
3CGR |
7!A:19!B |
U:A |
WC_PSU [---][-] |
10.53 |
74.16; 55.19 |
18.97 |
-10.45 |
0.11 |
9.71 |
| snoRNA |
3CGR |
8!A:18!B |
A:U |
WC [cWW][XX] |
10.44 |
57.73; 56.77 |
0.95 |
-13.49 |
0.32 |
15.43 |
| snoRNA |
3CGR |
9!A:17!B |
G:C |
WC [cWW][XIX] |
10.42 |
53.78; 56.33 |
2.55 |
-12.69 |
0.38 |
16.62 |
| snoRNA |
3CGR |
10!A:16!B |
U:A |
WC [cWW][XX] |
10.68 |
57.06; 56.66 |
0.4 |
-8.1 |
0.24 |
8.54 |
| snoRNA |
3CGR |
11!A:15!B |
G:C |
WC [cWW][XIX] |
10.36 |
56.19; 56.18 |
0.02 |
-8.94 |
0.05 |
12.69 |
| snoRNA |
3CGR |
12!A:14!B |
C:G |
WC [cWW][XIX] |
10.71 |
53.83; 53.6 |
0.23 |
-9.09 |
0.18 |
9.87 |