Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3CJZ
BPC Identified: 11
Ambiguities: 0
| dsRNA |
3CJZ |
1!A:25!B |
G:C |
WC [cWW][XIX] |
10.61 |
50.74; 53.79 |
3.05 |
-1.33 |
0.07 |
3.34 |
| dsRNA |
3CJZ |
2!A:24!B |
G:C |
WC [cWW][XIX] |
10.63 |
52.84; 53.68 |
0.84 |
-10.24 |
0.08 |
15.0 |
| dsRNA |
3CJZ |
3!A:23!B |
A:U |
WC [cWW][XX] |
10.71 |
49.87; 52.46 |
2.59 |
-11.49 |
0.36 |
17.2 |
| dsRNA |
3CJZ |
4!A:22!B |
C:G |
WC [cWW][XIX] |
10.58 |
58.4; 52.8 |
5.6 |
-14.38 |
0.11 |
17.63 |
| dsRNA |
3CJZ |
5!A:21!B |
G:C |
WC [cWW][XIX] |
10.79 |
51.95; 51.77 |
0.18 |
-12.92 |
0.27 |
21.07 |
| dsRNA |
3CJZ |
7!A:19!B |
A:G |
WC [cWW][VIII] |
13.23 |
42.85; 43.07 |
0.23 |
-9.5 |
0.08 |
16.21 |
| dsRNA |
3CJZ |
8!A:18!B |
C:G |
WC [cWW][XIX] |
10.67 |
55.03; 52.27 |
2.76 |
-17.62 |
0.73 |
25.67 |
| dsRNA |
3CJZ |
9!A:17!B |
G:C |
WC [cWW][XIX] |
10.62 |
51.6; 56.71 |
5.12 |
-14.65 |
0.11 |
21.5 |
| dsRNA |
3CJZ |
10!A:16!B |
U:A |
WC [cWW][XX] |
10.69 |
51.51; 53.86 |
2.35 |
-11.81 |
0.02 |
14.54 |
| dsRNA |
3CJZ |
11!A:15!B |
C:G |
WC [cWW][XIX] |
10.57 |
54.21; 53.08 |
1.13 |
-14.25 |
0.01 |
15.52 |
| dsRNA |
3CJZ |
12!A:14!B |
C:G |
WC [cWW][XIX] |
10.59 |
54.87; 52.34 |
2.53 |
-9.43 |
0.14 |
11.06 |