Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3CW5 BPC Identified: 33 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 3CW5 2!A:71!A G:C WC [cWW][XIX] 10.43 50.89; 53.81 2.92 -5.5 0.32 16.6
tRNA 3CW5 3!A:70!A C:G WC [cWW][XIX] 10.55 50.29; 53.06 2.77 -7.91 0.18 9.56
tRNA 3CW5 4!A:69!A G:C WC [cWW][XIX] 10.56 51.32; 55.16 3.84 0.6 0.28 8.5
tRNA 3CW5 5!A:68!A G:C WC [cWW][XIX] 10.17 52.8; 59.09 6.29 -1.68 0.02 12.17
tRNA 3CW5 6!A:67!A G:C WC [cWW][XIX] 10.43 50.28; 57.8 7.51 -3.46 0.44 11.02
tRNA 3CW5 7!A:66!A G:C WC [cWW][XIX] 10.52 49.64; 55.6 5.96 2.85 0.02 2.09
tRNA 3CW5 8!A:14!A U:A rH_4SU [---][-] 9.47 32.83; 18.97 13.86 158.69 0.91 26.66
tRNA 3CW5 10!A:45!A G:G pS_1 [cSH][-] 8.46 45.79; 126.85 81.05 -1.13 0.82 22.82
tRNA 3CW5 10!A:25!A G:C WC [cWW][XIX] 10.45 51.96; 55.49 3.53 4.24 0.61 2.88
tRNA 3CW5 11!A:24!A A:U WC [cWW][XX] 10.41 56.17; 52.2 3.98 6.2 0.09 11.61
tRNA 3CW5 12!A:23!A G:C WC [cWW][XIX] 10.54 56.79; 53.97 2.81 -7.93 0.23 26.22
tRNA 3CW5 13!A:22!A C:G WC [cWW][XIX] 10.6 55.55; 55.0 0.55 -5.27 0.15 14.36
tRNA 3CW5 15!A:48!A G:C rWb [tWW][XXII] 10.48 34.32; 55.1 20.78 -168.94 0.26 13.78
tRNA 3CW5 18!A:55!A G:U fS_PSU [---][-] 8.79 23.88; 116.58 92.7 -140.54 0.78 31.03
tRNA 3CW5 19!A:56!A G:C WC [cWW][XIX] 10.63 50.18; 45.54 4.64 -8.73 0.42 17.51
tRNA 3CW5 22!A:46!A G:A rH*_1 [tHW][-] 12.25 20.45; 24.38 3.93 -165.29 0.15 8.41
tRNA 3CW5 26!A:44!A G:A WC [cWW][VIII] 12.44 48.52; 54.34 5.82 -9.22 0.87 26.82
tRNA 3CW5 27!A:43!A U:A WC [cWW][XX] 10.47 53.83; 51.14 2.69 -10.73 0.8 25.87
tRNA 3CW5 28!A:42!A C:G WC [cWW][XIX] 10.39 59.69; 54.08 5.61 -10.85 0.06 13.62
tRNA 3CW5 29!A:41!A G:C WC [cWW][XIX] 10.73 51.55; 51.58 0.03 1.48 0.22 3.72
tRNA 3CW5 29!A:37!A G:A rH*_1 [tHW][-] 12.06 22.29; 18.48 3.81 135.68 0.98 24.76
tRNA 3CW5 30!A:40!A G:C WC [cWW][XIX] 10.45 58.36; 49.5 8.85 0.77 0.04 23.69
tRNA 3CW5 31!A:39!A G:C WC [cWW][XIX] 10.38 57.41; 54.71 2.7 -10.16 1.17 31.09
tRNA 3CW5 32!A:38!A C:A Wb [cWW][-] 10.41 71.5; 35.42 36.08 -0.35 0.14 19.13
tRNA 3CW5 33!A:36!A U:U S(bp:N3-O2P) [---][-] 8.11 75.45; 42.5 32.96 -154.85 0.6 29.68
tRNA 3CW5 33!A:35!A U:A S(sb:O2*-N7) [---][-] 6.64 71.67; 42.79 28.88 -175.17 0.94 36.77
tRNA 3CW5 49!A:65!A G:C WC [cWW][XIX] 10.9 52.3; 50.02 2.28 0.45 0.01 1.3
tRNA 3CW5 50!A:64!A U:G Wb [cWW][XXVIII] 10.36 61.86; 39.24 22.62 -1.92 0.04 4.58
tRNA 3CW5 51!A:63!A C:G WC [cWW][XIX] 10.31 56.4; 50.29 6.12 -6.15 0.11 11.76
tRNA 3CW5 52!A:62!A G:C WC [cWW][XIX] 10.69 55.22; 51.06 4.16 -0.71 0.07 2.26
tRNA 3CW5 53!A:61!A G:C WC [cWW][XIX] 10.35 55.78; 58.66 2.88 1.24 0.59 17.37
tRNA 3CW5 54!A:58!A U:A rH_1 [tWH][XXIV] 9.61 28.34; 19.28 9.05 173.23 0.42 14.78
tRNA 3CW5 55!A:57!A U:A S_PSU(sb:O2*-N7) [---][-] 6.52 91.71; 40.97 50.74 -174.18 1.09 33.1