| RNA | PDB | Position | bp | bpC; LG [LW][Sanger] | dCC | <X ; <Y | |<X - <Y| | Torsion | Z-Diff | Buckle |
| siRNA | 3CZ3 | 1!E:19!F | C:G | WC [cWW][XIX] | 10.4 | 49.18; 59.77 | 10.6 | -5.88 | 0.07 | 9.05 |
| siRNA | 3CZ3 | 2!E:18!F | G:C | Wb [---][-] | 10.22 | 50.77; 66.43 | 15.66 | -9.43 | 0.41 | 19.06 |
| siRNA | 3CZ3 | 3!E:17!F | U:A | Wb* [---][-] | 10.4 | 45.47; 64.82 | 19.35 | 8.93 | 1.2 | 2.1 |
| siRNA | 3CZ3 | 4!E:16!F | A:U | Wb* [---][-] | 10.92 | 61.22; 41.18 | 20.05 | 24.85 | 0.21 | 22.28 |
| siRNA | 3CZ3 | 5!E:15!F | C:G | WC [cWW][XIX] | 10.36 | 52.35; 59.23 | 6.88 | -0.58 | 0.73 | 10.02 |
| siRNA | 3CZ3 | 6!E:14!F | G:C | WC [cWW][XIX] | 10.89 | 52.78; 52.26 | 0.52 | 2.37 | 0.47 | 17.24 |
| siRNA | 3CZ3 | 7!E:13!F | C:G | WC [cWW][XIX] | 10.49 | 55.45; 56.79 | 1.34 | 5.27 | 0.79 | 15.29 |
| siRNA | 3CZ3 | 8!E:12!F | G:C | WC [cWW][XIX] | 10.7 | 58.3; 59.93 | 1.63 | -1.79 | 0.48 | 11.7 |
| siRNA | 3CZ3 | 9!E:11!F | G:C | WC [cWW][XIX] | 10.64 | 51.14; 57.66 | 6.52 | 4.61 | 0.02 | 8.92 |
| siRNA | 3CZ3 | 10!E:10!F | A:U | Wb [---][-] | 10.8 | 44.02; 60.62 | 16.61 | 3.14 | 0.16 | 7.77 |
| siRNA | 3CZ3 | 11!E:9!F | A:U | WC [cWW][XX] | 10.3 | 47.97; 60.51 | 12.54 | 14.47 | 0.45 | 25.09 |
| siRNA | 3CZ3 | 12!E:8!F | U:A | WC [cWW][XX] | 10.33 | 61.5; 60.21 | 1.29 | 5.6 | 0.37 | 17.53 |
| siRNA | 3CZ3 | 13!E:7!F | A:U | WC [cWW][XX] | 10.23 | 51.68; 61.69 | 10.01 | -0.39 | 0.14 | 7.66 |
| siRNA | 3CZ3 | 14!E:6!F | C:G | WC [cWW][XIX] | 10.91 | 50.16; 53.58 | 3.42 | 15.53 | 1.1 | 7.09 |
| siRNA | 3CZ3 | 15!E:5!F | U:A | WC [cWW][XX] | 10.3 | 54.52; 60.04 | 5.51 | -4.17 | 0.23 | 4.7 |
| siRNA | 3CZ3 | 16!E:4!F | U:A | WC [cWW][XX] | 10.33 | 58.37; 60.57 | 2.2 | -7.13 | 0.92 | 28.48 |
| siRNA | 3CZ3 | 17!E:3!F | C:G | WC [cWW][XIX] | 10.57 | 60.57; 57.51 | 3.06 | -2.97 | 0.28 | 13.23 |
| siRNA | 3CZ3 | 18!E:2!F | G:C | WC [cWW][XIX] | 10.75 | 50.34; 55.85 | 5.51 | -7.94 | 0.06 | 11.99 |
| siRNA | 3CZ3 | 19!E:1!F | A:U | WC [cWW][XX] | 10.82 | 57.32; 50.58 | 6.75 | 3.7 | 0.48 | 24.55 |
| siRNA | 3CZ3 | 1!G:19!H* | C:G | WC [cWW][XIX]; Wb* [---][-] | 11.01 | 47.28; 60.67 | 13.39 | -1.45 | 0.27 | 10.26 |
| siRNA | 3CZ3 | 2!G:18!H | G:C | WC [cWW][XIX] | 10.36 | 62.6; 56.45 | 6.16 | 5.03 | 0.53 | 1.52 |
| siRNA | 3CZ3 | 3!G:17!H | U:A | Wb* [---][-] | 10.3 | 51.62; 67.76 | 16.14 | -3.05 | 0.54 | 13.0 |
| siRNA | 3CZ3 | 5!G:15!H | C:G | WC [cWW][XIX] | 10.91 | 54.76; 56.5 | 1.73 | -6.23 | 0.8 | 19.7 |
| siRNA | 3CZ3 | 6!G:14!H | G:C | WC [cWW][XIX] | 11.08 | 51.37; 50.0 | 1.37 | -1.87 | 0.41 | 2.32 |
| siRNA | 3CZ3 | 7!G:13!H | C:G | WC [cWW][XIX] | 10.6 | 59.67; 54.57 | 5.11 | 12.3 | 0.59 | 24.31 |
| siRNA | 3CZ3 | 8!G:12!H | G:C | WC [cWW][XIX] | 10.89 | 57.58; 50.31 | 7.27 | -5.77 | 0.1 | 16.35 |
| siRNA | 3CZ3 | 9!G:11!H | G:C | WC_Mo [cWW][XIX] | 10.78 | 62.48; 63.62 | 1.14 | 3.92 | 0.21 | 8.11 |
| siRNA | 3CZ3 | 10!G:10!H | A:U | WC [cWW][XX] | 10.68 | 53.49; 55.17 | 1.68 | 4.09 | 0.58 | 19.73 |
| siRNA | 3CZ3 | 11!G:9!H | A:U | WC [cWW][XX] | 10.82 | 60.19; 51.74 | 8.44 | 8.74 | 0.99 | 18.49 |
| siRNA | 3CZ3 | 12!G:8!H | U:A | WC [cWW][XX] | 10.44 | 59.01; 56.09 | 2.93 | 2.43 | 1.12 | 27.79 |
| siRNA | 3CZ3 | 13!G:7!H | A:U | WC [cWW][XX] | 10.72 | 57.84; 55.25 | 2.59 | -14.33 | 0.21 | 17.6 |
| siRNA | 3CZ3 | 14!G:6!H | C:G | WC [cWW][XIX] | 11.07 | 57.51; 55.09 | 2.41 | -4.75 | 0.75 | 21.66 |
| siRNA | 3CZ3 | 15!G:5!H | U:A | WC [cWW][XX] | 10.33 | 57.16; 60.95 | 3.8 | -3.04 | 0.03 | 8.21 |
| siRNA | 3CZ3 | 16!G:4!H | U:A | WC [cWW][XX] | 10.44 | 54.35; 62.76 | 8.41 | -4.33 | 0.16 | 10.68 |
| siRNA | 3CZ3 | 17!G:3!H | C:G | WC [cWW][XIX] | 11.28 | 45.82; 54.12 | 8.3 | -12.44 | 0.95 | 5.63 |
| siRNA | 3CZ3 | 18!G:2!H | G:C | WC [cWW][XIX] | 10.54 | 54.21; 60.5 | 6.29 | -16.58 | 0.04 | 21.68 |
| siRNA | 3CZ3 | 19!G:1!H | A:U | WC [cWW][XX] | 11.28 | 54.8; 54.68 | 0.11 | -9.23 | 1.28 | 24.16 |