Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3CZW
BPC Identified: 14
Ambiguities: 0
dsRNA |
3CZW |
3!X:16!Y |
G:C |
WC [cWW][XIX] |
10.42 |
55.83; 60.68 |
4.85 |
3.41 |
0.35 |
7.51 |
dsRNA |
3CZW |
4!X:15!Y |
G:C |
WC [cWW][XIX] |
10.59 |
55.27; 55.91 |
0.65 |
-2.66 |
0.1 |
7.79 |
dsRNA |
3CZW |
5!X:14!Y |
U:G |
Wb [cWW][XXVIII] |
10.42 |
68.75; 43.4 |
25.35 |
-8.71 |
0.4 |
13.99 |
dsRNA |
3CZW |
6!X:13!Y |
C:G |
WC [cWW][XIX] |
10.64 |
56.23; 56.78 |
0.55 |
-8.75 |
0.03 |
11.62 |
dsRNA |
3CZW |
7!X:12!Y |
U:A |
WC [cWW][XX] |
10.56 |
57.24; 55.2 |
2.04 |
-3.15 |
0.07 |
4.94 |
dsRNA |
3CZW |
8!X:11!Y |
G:G |
H_1 [cWH][VI] |
11.42 |
36.0; 64.36 |
28.36 |
1.33 |
0.62 |
15.92 |
dsRNA |
3CZW |
9!X:10!Y |
A:U |
WC [cWW][XX] |
10.61 |
55.62; 55.81 |
0.19 |
-8.7 |
0.1 |
10.27 |
dsRNA |
3CZW |
10!X:9!Y |
U:A |
WC [cWW][XX] |
10.61 |
55.81; 55.62 |
0.19 |
-8.7 |
0.1 |
10.27 |
dsRNA |
3CZW |
11!X:8!Y |
G:G |
H_1 [cWH][VI] |
11.42 |
64.36; 36.0 |
28.36 |
1.33 |
0.62 |
15.92 |
dsRNA |
3CZW |
12!X:7!Y |
A:U |
WC [cWW][XX] |
10.56 |
55.2; 57.24 |
2.04 |
-3.15 |
0.07 |
4.94 |
dsRNA |
3CZW |
13!X:6!Y |
G:C |
WC [cWW][XIX] |
10.64 |
56.78; 56.23 |
0.55 |
-8.75 |
0.03 |
11.62 |
dsRNA |
3CZW |
14!X:5!Y |
G:U |
Wb [cWW][XXVIII] |
10.42 |
43.4; 68.75 |
25.35 |
-8.71 |
0.4 |
13.99 |
dsRNA |
3CZW |
15!X:4!Y |
C:G |
WC [cWW][XIX] |
10.59 |
55.91; 55.27 |
0.65 |
-2.66 |
0.1 |
7.79 |
dsRNA |
3CZW |
16!X:3!Y |
C:G |
WC [cWW][XIX] |
10.42 |
60.68; 55.83 |
4.85 |
3.41 |
0.35 |
7.51 |