Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3DIS BPC Identified: 90 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3DIS 1!A:174!A G:C WC [cWW][XIX] 11.0 52.41; 47.28 5.13 -5.41 0.53 9.17
Riboswitch 3DIS 2!A:173!A G:U Wb [cWW][XXVIII] 10.64 40.59; 66.5 25.9 -8.14 0.03 13.44
Riboswitch 3DIS 3!A:172!A C:G WC [cWW][XIX] 10.75 50.68; 59.05 8.37 -9.78 0.04 14.09
Riboswitch 3DIS 4!A:171!A C:G WC [cWW][XIX] 10.58 57.94; 51.21 6.73 -8.93 0.15 12.19
Riboswitch 3DIS 5!A:170!A G:C WC [cWW][XIX] 10.54 52.21; 54.11 1.9 -5.0 0.12 6.64
Riboswitch 3DIS 6!A:169!A A:U WC [cWW][XX] 10.58 54.18; 52.37 1.81 -5.31 0.25 9.14
Riboswitch 3DIS 7!A:168!A C:G WC [cWW][XIX] 10.65 51.05; 53.76 2.71 -14.0 0.35 25.5
Riboswitch 3DIS 8!A:167!A G:C WC [cWW][XIX] 10.5 53.47; 53.52 0.05 -11.98 0.39 25.79
Riboswitch 3DIS 9!A:166!A G:C WC [cWW][XIX] 10.92 51.85; 49.37 2.48 -15.58 0.57 26.07
Riboswitch 3DIS 10!A:165!A A:G WC [cWW][VIII] 12.84 50.73; 46.88 3.85 -5.93 0.22 13.24
Riboswitch 3DIS 11!A:163!A G:G rH_1 [tWH][VII] 11.22 30.26; 29.8 0.46 -159.16 0.33 10.55
Riboswitch 3DIS 12!A:79!A G:C WC [cWW][XIX] 10.55 53.46; 52.49 0.97 21.99 0.03 26.21
Riboswitch 3DIS 14!A:81!A G:A rS [tSS][-] 8.09 87.87; 61.27 26.6 164.27 0.73 21.84
Riboswitch 3DIS 14!A:78!A G:C WC [cWW][XIX] 10.62 54.37; 55.87 1.5 -6.99 0.13 20.14
Riboswitch 3DIS 15!A:82!A C:A rS(ss:O2*-O2*)_2 [---][-] 5.51 153.68; 144.66 9.01 -108.78 0.55 25.47
Riboswitch 3DIS 15!A:77!A C:G WC [cWW][XIX] 10.59 56.51; 50.23 6.28 -6.99 0.23 15.85
Riboswitch 3DIS 16!A:76!A G:C WC [cWW][XIX] 10.52 56.59; 52.53 4.05 -7.58 0.04 13.69
Riboswitch 3DIS 17!A:75!A C:G WC [cWW][XIX] 10.67 51.19; 54.75 3.56 -4.7 0.12 9.93
Riboswitch 3DIS 18!A:74!A C:G WC [cWW][XIX] 10.61 54.34; 52.88 1.47 -2.86 0.1 6.14
Riboswitch 3DIS 19!A:73!A C:G WC [cWW][XIX] 10.76 53.0; 50.21 2.79 -2.78 0.04 3.01
Riboswitch 3DIS 20!A:72!A G:A S [tSH][XI] 9.13 97.76; 8.9 88.86 32.48 0.28 20.5
Riboswitch 3DIS 21!A:71!A A:G S [tSH][XI] 9.42 2.93; 97.31 94.38 -67.5 0.67 16.35
Riboswitch 3DIS 22!A:70!A G:C WC [cWW][XIX] 10.94 55.51; 50.35 5.16 -0.96 0.09 2.9
Riboswitch 3DIS 23!A:69!A A:G WC [cWW][VIII] 12.61 51.45; 51.37 0.07 8.91 0.58 4.22
Riboswitch 3DIS 25!A:67!A G:A S [tSH][XI] 9.52 94.2; 0.61 93.59 -54.52 0.81 16.41
Riboswitch 3DIS 26!A:66!A A:A rS* [tHH][-] 11.25 13.72; 17.45 3.73 -125.0 0.78 16.3
Riboswitch 3DIS 27!A:65!A G:A S(bp:N1-O2P)_3 [---][-] 10.78 83.0; 62.79 20.21 -168.82 0.16 16.29
Riboswitch 3DIS 27!A:28!A G:U pS* [cHS][-] 6.81 141.07; 54.36 86.71 1.61 0.01 1.28
Riboswitch 3DIS 28!A:65!A U:A rH_1 [tWH][XXIV] 9.23 28.8; 24.75 4.06 -157.07 0.28 16.89
Riboswitch 3DIS 29!A:64!A A:G S [tSH][XI] 9.48 9.3; 102.41 93.11 -9.88 0.42 12.83
Riboswitch 3DIS 30!A:63!A G:U Wb [cWW][XXVIII] 10.49 36.9; 65.45 28.55 -2.21 0.51 13.2
Riboswitch 3DIS 31!A:62!A G:C WC [cWW][XIX] 11.08 53.74; 47.55 6.19 -10.0 0.4 22.95
Riboswitch 3DIS 32!A:61!A C:G WC [cWW][XIX] 11.0 46.8; 52.19 5.4 -11.82 0.19 18.41
Riboswitch 3DIS 33!A:60!A U:G Wb [cWW][XXVIII] 10.64 67.75; 44.41 23.34 -20.2 0.07 22.98
Riboswitch 3DIS 34!A:59!A G:C WC [cWW][XIX] 10.73 52.49; 52.99 0.5 -7.82 0.46 7.6
Riboswitch 3DIS 35!A:58!A U:A WC [cWW][XX] 10.81 45.02; 56.2 11.17 -5.42 1.08 27.38
Riboswitch 3DIS 36!A:57!A C:G WC_Mo [cWW][XIX] 10.18 64.22; 64.3 0.09 -22.23 0.47 36.45
Riboswitch 3DIS 37!A:56!A C:G WC [cWW][XIX] 10.81 49.0; 60.58 11.58 -7.38 0.18 9.86
Riboswitch 3DIS 38!A:55!A C:G WC [cWW][XIX] 10.4 62.14; 51.52 10.62 3.14 0.37 2.34
Riboswitch 3DIS 40!A:54!A U:G Wb [cWW][XXVIII] 10.68 51.37; 42.28 9.09 -31.25 2.42 6.32
Riboswitch 3DIS 40!A:52!A U:U rWb [tWW][XIII] 8.68 39.13; 49.06 9.93 176.59 1.79 40.72
Riboswitch 3DIS 41!A:54!A C:G WC [cWW][XIX] 10.86 49.87; 49.68 0.19 2.32 0.66 19.4
Riboswitch 3DIS 42!A:50!A A:A rH [tWH][V] 12.08 28.31; 20.74 7.57 122.71 1.4 29.84
Riboswitch 3DIS 43!A:47!A G:A rH_2v [---][-] 13.67 22.77; 12.87 9.9 -23.4 0.96 85.57
Riboswitch 3DIS 44!A:100!A G:C WC [cWW][XIX] 10.68 52.76; 54.03 1.27 -7.98 0.05 14.65
Riboswitch 3DIS 45!A:99!A G:C WC [cWW][XIX] 10.68 54.0; 52.61 1.39 3.31 0.01 7.74
Riboswitch 3DIS 46!A:98!A G:C WC [cWW][XIX] 10.41 53.15; 56.44 3.29 5.58 0.12 6.03
Riboswitch 3DIS 47!A:97!A A:U WC [cWW][XX] 10.6 58.29; 51.95 6.34 -0.82 0.11 19.26
Riboswitch 3DIS 48!A:96!A G:C WC [cWW][XIX] 10.93 53.79; 50.81 2.98 -5.2 0.07 8.49
Riboswitch 3DIS 49!A:95!A G:C WC [cWW][XIX] 10.68 53.1; 51.74 1.36 -13.03 0.57 29.07
Riboswitch 3DIS 68!A:126!A G:A H_1 [cWH][IX] 10.96 50.1; 39.83 10.27 31.92 0.17 44.8
Riboswitch 3DIS 69!A:129!A G:A fS(sb:O2*-N1)_1 [---][-] 8.94 110.48; 43.4 67.08 -139.63 0.04 45.32
Riboswitch 3DIS 69!A:127!A G:A fS [tSW][X] 9.57 107.77; 7.38 100.39 -81.21 2.02 52.65
Riboswitch 3DIS 78!A:81!A C:A rpS(bs:O2-O2*) [cSS][-] 5.92 104.51; 153.61 49.1 -41.26 2.34 7.17
Riboswitch 3DIS 82!A:113!A A:U WC [cWW][XX] 10.17 52.84; 57.21 4.36 3.64 0.35 10.44
Riboswitch 3DIS 83!A:112!A G:C WC [cWW][XIX] 10.45 59.25; 56.01 3.24 0.42 0.01 6.34
Riboswitch 3DIS 84!A:111!A G:C WC [cWW][XIX] 10.51 53.59; 55.41 1.81 0.91 0.37 4.15
Riboswitch 3DIS 85!A:109!A G:U Wb [cWW][XXVIII] 10.41 37.39; 67.15 29.76 -9.87 0.26 7.6
Riboswitch 3DIS 86!A:108!A U:A WC [cWW][XX] 10.33 56.42; 51.75 4.67 -15.24 0.41 22.74
Riboswitch 3DIS 87!A:107!A G:C WC [cWW][XIX] 10.52 51.89; 55.5 3.61 -9.94 0.22 11.0
Riboswitch 3DIS 88!A:106!A C:G WC [cWW][XIX] 10.72 51.89; 53.83 1.94 -7.35 0.11 10.61
Riboswitch 3DIS 89!A:105!A A:U WC [cWW][XX] 10.38 56.92; 55.45 1.47 -3.57 0.04 7.51
Riboswitch 3DIS 90!A:104!A G:C WC [cWW][XIX] 10.76 49.05; 53.22 4.17 -1.14 0.05 8.84
Riboswitch 3DIS 91!A:103!A A:U WC [cWW][XX] 10.32 63.49; 56.35 7.14 -6.44 0.17 12.39
Riboswitch 3DIS 92!A:102!A G:C WC [cWW][XIX] 10.77 57.89; 52.1 5.79 -7.08 0.18 28.05
Riboswitch 3DIS 93!A:101!A U:G Wb [cWW][XXVIII] 10.57 65.69; 37.35 28.34 -6.75 0.08 10.77
Riboswitch 3DIS 114!A:140!A G:U Wb [cWW][XXVIII] 10.39 42.94; 66.53 23.59 -0.8 0.07 4.02
Riboswitch 3DIS 115!A:139!A G:C WC [cWW][XIX] 10.77 50.86; 52.08 1.22 -6.22 0.56 19.32
Riboswitch 3DIS 116!A:138!A G:A WC [cWW][VIII] 12.76 46.95; 41.94 5.01 3.38 0.2 8.43
Riboswitch 3DIS 117!A:137!A G:C WC [cWW][XIX] 10.83 52.39; 52.76 0.37 -10.94 0.31 12.02
Riboswitch 3DIS 118!A:136!A G:C WC [cWW][XIX] 10.6 52.1; 52.44 0.34 -12.21 0.31 12.69
Riboswitch 3DIS 119!A:135!A U:A WC [cWW][XX] 10.77 46.86; 54.77 7.9 -12.58 0.08 18.54
Riboswitch 3DIS 120!A:134!A A:U WC [cWW][XX] 10.29 59.28; 54.75 4.54 -13.25 0.29 15.56
Riboswitch 3DIS 121!A:133!A U:A WC [cWW][XX] 10.5 58.64; 51.8 6.84 -11.22 0.22 10.4
Riboswitch 3DIS 122!A:132!A G:C WC [cWW][XIX] 10.48 59.95; 54.48 5.46 -3.14 0.26 8.81
Riboswitch 3DIS 123!A:131!A G:C WC [cWW][XIX] 10.67 59.5; 50.09 9.41 0.27 0.05 8.32
Riboswitch 3DIS 124!A:130!A G:C WC [cWW][XIX] 10.39 54.27; 58.61 4.34 -1.49 0.57 14.31
Riboswitch 3DIS 125!A:129!A G:A S [tSH][XI] 10.24 96.77; 4.33 92.44 -64.51 0.35 8.18
Riboswitch 3DIS 125!A:127!A G:A S(sb:O2*-N7) [---][-] 7.22 80.37; 42.39 37.97 -168.05 2.08 25.1
Riboswitch 3DIS 141!A:163!A G:G S_1 [tSH][-] 11.1 85.68; 6.89 78.79 37.96 0.1 6.5
Riboswitch 3DIS 141!A:162!A G:A WC [cWW][VIII] 12.51 52.08; 49.18 2.9 -18.49 0.04 30.02
Riboswitch 3DIS 142!A:166!A U:C rS(ss:O2*-O2*) [---][-] 5.56 156.43; 140.37 16.06 -135.23 0.05 28.21
Riboswitch 3DIS 142!A:161!A U:G Wb [cWW][XXVIII] 10.6 61.82; 38.34 23.48 -16.05 0.4 19.21
Riboswitch 3DIS 143!A:160!A C:G WC [cWW][XIX] 10.88 49.68; 56.34 6.66 -14.28 0.36 23.15
Riboswitch 3DIS 144!A:159!A A:U WC [cWW][XX] 10.31 57.21; 55.81 1.4 -11.07 0.13 16.03
Riboswitch 3DIS 145!A:158!A C:G WC [cWW][XIX] 10.72 56.8; 48.39 8.41 -8.7 0.38 18.56
Riboswitch 3DIS 146!A:157!A G:C WC [cWW][XIX] 10.46 51.75; 58.11 6.37 -2.53 0.04 5.62
Riboswitch 3DIS 147!A:156!A G:C WC [cWW][XIX] 10.79 56.39; 53.87 2.52 -2.35 0.15 1.37
Riboswitch 3DIS 148!A:155!A A:U WC [cWW][XX] 10.71 50.54; 54.4 3.86 0.3 0.1 8.16
Riboswitch 3DIS 149!A:154!A G:C WC [cWW][XIX] 10.48 51.51; 56.95 5.44 0.05 0.01 10.54