Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3DS7 BPC Identified: 69 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3DS7 15!A:81!A G:C WC [cWW][XIX] 10.8 49.29; 52.18 2.89 -5.94 0.07 11.62
Riboswitch 3DS7 16!A:80!A G:C WC [cWW][XIX] 10.65 51.97; 51.67 0.29 -15.88 0.11 13.62
Riboswitch 3DS7 17!A:79!A !A:U WC [cWW][XX] 10.76 48.31; 52.6 4.29 -13.99 0.16 18.24
Riboswitch 3DS7 18!A:78!A C:G WC [cWW][XIX] 10.68 50.46; 55.15 4.69 -12.48 0.15 18.28
Riboswitch 3DS7 19!A:77!A !A:U WC [cWW][XX] 10.29 53.82; 57.78 3.96 -13.75 0.05 11.56
Riboswitch 3DS7 20!A:76!A U:A WC [cWW][XX] 10.56 56.64; 53.39 3.24 -15.41 0.31 21.61
Riboswitch 3DS7 21!A:75!A !A:U WC [cWW][XX] 10.82 53.15; 52.23 0.93 -6.12 0.1 9.54
Riboswitch 3DS7 22!A:52!A C:G WC [cWW][XIX] 10.85 53.33; 51.42 1.91 -0.94 0.26 6.45
Riboswitch 3DS7 23!A:46!A !A:G fS [tSW][X] 9.4 5.34; 120.52 115.19 127.2 0.35 4.49
Riboswitch 3DS7 24!A:53!A !A:C rpS(ss:O2*-O2*)_1 [cSS][-] 5.32 146.91; 132.18 14.73 -125.46 1.9 40.28
Riboswitch 3DS7 25!A:45!A U:A WC [cWW][XX] 10.26 58.02; 58.38 0.36 -14.19 0.12 18.53
Riboswitch 3DS7 26!A:44!A C:A Wb* [cWW][-] 10.39 51.28; 72.67 21.39 -12.58 0.05 18.89
Riboswitch 3DS7 27!A:43!A G:C WC [cWW][XIX] 10.64 55.93; 56.46 0.53 -9.56 0.26 13.13
Riboswitch 3DS7 28!A:42!A C:G WC [cWW][XIX] 10.68 55.62; 56.63 1.01 -2.87 0.21 5.69
Riboswitch 3DS7 29!A:41!A G:C WC [cWW][XIX] 10.63 54.34; 56.16 1.82 -8.27 0.01 11.46
Riboswitch 3DS7 30!A:40!A U:A WC [cWW][XX] 10.38 58.87; 58.55 0.32 -6.78 0.14 7.14
Riboswitch 3DS7 31!A:39!A G:C WC [cWW][XIX] 10.6 57.5; 54.51 2.99 -2.11 0.06 7.5
Riboswitch 3DS7 33!A:66!A !A:A rH [tWH][V] 12.25 23.04; 18.06 4.98 146.67 0.02 8.36
Riboswitch 3DS7 33!A:37!A !A:G rpS(sb:O2*-N3) [---][-] 5.25 103.8; 155.73 51.93 -12.63 1.77 14.36
Riboswitch 3DS7 34!A:65!A U:A rH_1 [tWH][XXIV] 9.61 31.33; 19.99 11.34 175.5 0.07 8.06
Riboswitch 3DS7 34!A:37!A U:G rpS [cSS][-] 4.36 120.83; 101.15 19.68 120.92 1.39 23.43
Riboswitch 3DS7 35!A:64!A !A:A rH [tWH][V] 12.24 20.47; 20.81 0.34 170.51 0.17 3.72
Riboswitch 3DS7 37!A:61!A G:C WC [cWW][XIX] 10.77 50.26; 54.39 4.14 -18.63 0.42 10.78
Riboswitch 3DS7 38!A:66!A G:A fS [tSW][X] 9.33 118.61; 24.21 94.4 -91.38 0.18 31.67
Riboswitch 3DS7 38!A:60!A G:C WC [cWW][XIX] 10.49 55.61; 55.38 0.22 -5.71 0.86 25.76
Riboswitch 3DS7 46!A:53!A G:C WC [cWW][XIX] 10.64 54.07; 53.19 0.88 3.09 0.93 23.39
Riboswitch 3DS7 50!A:75!A C:U pfS [cSW][-] 7.71 35.49; 140.02 104.53 -23.96 0.49 22.27
Riboswitch 3DS7 54!A:72!A C:G WC [cWW][XIX] 10.59 57.3; 54.51 2.79 -10.76 0.11 17.38
Riboswitch 3DS7 55!A:71!A G:C WC [cWW][XIX] 10.73 51.73; 52.84 1.12 -14.24 0.41 10.07
Riboswitch 3DS7 56!A:70!A G:C WC [cWW][XIX] 10.7 50.76; 55.31 4.55 -15.18 0.18 16.45
Riboswitch 3DS7 57!A:69!A G:U Wb [cWW][XXVIII] 10.52 40.58; 67.53 26.95 -13.33 0.14 17.12
Riboswitch 3DS7 58!A:68!A C:G WC [cWW][XIX] 10.58 56.28; 54.88 1.4 -12.84 0.14 18.14
Riboswitch 3DS7 59!A:67!A !A:U WC [cWW][XX] 10.48 58.66; 55.73 2.93 -13.49 0.01 6.98
Riboswitch 3DS7 61!A:65!A C:A pfS [cSW][-] 9.03 131.56; 40.73 90.83 16.61 0.61 14.51
Riboswitch 3DS7 62!A:63!A G:U pS* [cHS][-] 6.43 141.28; 56.63 84.65 5.07 0.46 10.12
Riboswitch 3DS7 215!B:281!B G:C WC [cWW][XIX] 10.79 48.36; 54.75 6.4 8.08 0.22 12.1
Riboswitch 3DS7 216!B:280!B G:C WC [cWW][XIX] 10.63 53.82; 55.77 1.95 -5.17 0.26 16.97
Riboswitch 3DS7 217!B:279!B !A:U WC [cWW][XX] 10.32 59.04; 55.84 3.2 -4.14 0.14 9.97
Riboswitch 3DS7 218!B:278!B C:G WC [cWW][XIX] 10.54 54.65; 53.45 1.2 -8.15 0.1 15.2
Riboswitch 3DS7 219!B:277!B !A:U WC [cWW][XX] 10.08 59.46; 61.56 2.1 -14.95 0.0 17.66
Riboswitch 3DS7 220!B:276!B U:A WC [cWW][XX] 10.38 54.98; 57.24 2.26 -14.72 0.33 23.57
Riboswitch 3DS7 221!B:275!B !A:U WC [cWW][XX] 10.84 56.61; 57.41 0.8 -9.01 0.31 13.74
Riboswitch 3DS7 222!B:252!B C:G WC [cWW][XIX] 10.73 53.05; 54.49 1.43 -1.46 0.47 11.42
Riboswitch 3DS7 223!B:246!B !A:G fS [tSW][X] 9.25 3.79; 119.93 116.13 92.07 0.04 5.75
Riboswitch 3DS7 225!B:245!B U:A WC [cWW][XX] 10.25 58.72; 58.6 0.12 -9.58 0.29 13.45
Riboswitch 3DS7 226!B:244!B C:A Wb* [cWW][-] 10.56 48.27; 68.53 20.26 -1.76 0.02 12.67
Riboswitch 3DS7 227!B:243!B G:C WC [cWW][XIX] 10.71 55.24; 55.18 0.06 -12.19 0.33 13.42
Riboswitch 3DS7 228!B:242!B C:G WC [cWW][XIX] 10.65 54.18; 58.33 4.16 -1.63 0.17 8.62
Riboswitch 3DS7 229!B:241!B G:C WC [cWW][XIX] 10.68 54.24; 54.08 0.16 -10.61 0.09 12.85
Riboswitch 3DS7 230!B:240!B U:A WC [cWW][XX] 10.37 57.99; 58.07 0.08 -6.04 0.05 10.52
Riboswitch 3DS7 231!B:239!B G:C WC [cWW][XIX] 10.52 56.98; 54.16 2.82 -2.73 0.17 7.35
Riboswitch 3DS7 233!B:266!B !A:A rH [tWH][V] 12.37 24.29; 17.73 6.56 136.62 0.31 12.02
Riboswitch 3DS7 233!B:237!B !A:G rpS(sb:O2*-N3) [---][-] 5.28 103.31; 157.67 54.36 -20.26 1.87 14.76
Riboswitch 3DS7 234!B:265!B U:A rH_1 [tWH][XXIV] 9.53 29.31; 19.63 9.68 171.94 0.0 9.26
Riboswitch 3DS7 234!B:237!B U:G rpS [cSS][-] 4.43 122.52; 104.62 17.9 119.45 1.24 25.97
Riboswitch 3DS7 235!B:264!B !A:A rH [tWH][V] 12.22 20.79; 18.44 2.36 172.91 0.01 3.09
Riboswitch 3DS7 237!B:261!B G:C WC [cWW][XIX] 10.75 52.78; 53.68 0.9 -18.47 0.28 12.55
Riboswitch 3DS7 238!B:266!B G:A fS [tSW][X] 9.38 121.17; 24.85 96.32 -91.36 0.04 35.0
Riboswitch 3DS7 238!B:260!B G:C WC [cWW][XIX] 10.52 59.1; 56.73 2.37 -4.76 0.89 28.79
Riboswitch 3DS7 246!B:253!B G:C WC [cWW][XIX] 10.86 51.83; 56.66 4.83 15.72 0.39 19.5
Riboswitch 3DS7 250!B:275!B C:U pfS [cSW][-] 8.01 35.31; 141.72 106.4 -27.66 0.86 30.23
Riboswitch 3DS7 254!B:272!B C:G WC [cWW][XIX] 10.54 55.25; 56.83 1.58 -3.78 0.03 11.61
Riboswitch 3DS7 255!B:271!B G:C WC [cWW][XIX] 10.83 51.64; 53.43 1.79 -14.48 0.41 13.47
Riboswitch 3DS7 256!B:270!B G:C WC [cWW][XIX] 10.89 50.47; 53.19 2.72 -19.48 0.31 19.8
Riboswitch 3DS7 257!B:269!B G:U Wb [cWW][XXVIII] 10.61 39.95; 67.83 27.88 -17.99 0.08 18.05
Riboswitch 3DS7 258!B:268!B C:G WC [cWW][XIX] 10.63 55.15; 55.96 0.81 -13.23 0.06 17.03
Riboswitch 3DS7 259!B:267!B !A:U WC [cWW][XX] 10.52 59.04; 54.88 4.16 -10.97 0.07 10.21
Riboswitch 3DS7 261!B:265!B C:A pfS [cSW][-] 9.12 130.53; 41.6 88.93 18.54 0.69 15.05
Riboswitch 3DS7 262!B:263!B G:U pS* [cHS][-] 6.39 141.35; 54.69 86.66 12.2 0.16 11.26