Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3DW6
BPC Identified: 13
Ambiguities: 0
| rRNA |
3DW6 |
2648!A:2672!A |
G:U |
Wb [cWW][XXVIII] |
10.41 |
42.35; 68.8 |
26.45 |
-10.99 |
0.02 |
14.26 |
| rRNA |
3DW6 |
2649!A:2671!A |
C:G |
WC [cWW][XIX] |
10.63 |
53.63; 53.18 |
0.46 |
-15.88 |
0.36 |
21.2 |
| rRNA |
3DW6 |
2650!A:2670!A |
U:A |
WC [cWW][XX] |
10.62 |
55.79; 57.34 |
1.55 |
-17.04 |
0.12 |
14.11 |
| rRNA |
3DW6 |
2651!A:2669!A |
C:G |
WC [cWW][XIX] |
10.52 |
56.78; 55.02 |
1.76 |
-14.36 |
0.34 |
19.52 |
| rRNA |
3DW6 |
2652!A:2668!A |
C:G |
WC [cWW][XIX] |
10.76 |
54.49; 51.04 |
3.46 |
-10.13 |
0.02 |
13.37 |
| rRNA |
3DW6 |
2653!A:2667!A |
U:C |
sWC [---][-] |
10.71 |
80.37; 16.13 |
64.24 |
-5.78 |
0.35 |
12.21 |
| rRNA |
3DW6 |
2654!A:2666!A |
A:C |
rS* [tHH][-] |
12.64 |
10.59; 37.82 |
27.23 |
-60.51 |
1.53 |
24.39 |
| rRNA |
3DW6 |
2655!A:2665!A |
G:A |
S(bp:N1-O2P)_3 [---][-] |
10.64 |
81.49; 62.33 |
19.16 |
-172.0 |
1.23 |
20.11 |
| rRNA |
3DW6 |
2655!A:2656!A |
G:U |
pS* [cHS][-] |
6.85 |
143.54; 51.26 |
92.28 |
6.59 |
0.09 |
3.23 |
| rRNA |
3DW6 |
2656!A:2665!A |
U:A |
rH_1 [tWH][XXIV] |
9.64 |
27.34; 23.29 |
4.05 |
-169.41 |
0.78 |
18.4 |
| rRNA |
3DW6 |
2657!A:2664!A |
A:G |
S [tSH][XI] |
9.5 |
7.66; 98.49 |
90.84 |
-3.21 |
0.09 |
2.6 |
| rRNA |
3DW6 |
2658!A:2663!A |
C:G |
WC [cWW][XIX] |
10.62 |
56.09; 55.69 |
0.4 |
2.97 |
0.19 |
6.76 |
| rRNA |
3DW6 |
2659!A:2662!A |
G:A |
S [tSH][XI] |
9.23 |
99.49; 13.11 |
86.38 |
-111.45 |
0.68 |
19.51 |