Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3DW7
BPC Identified: 13
Ambiguities: 0
| rRNA |
3DW7 |
2648!A:2672!A |
G:U |
Wb [cWW][XXVIII] |
10.76 |
42.51; 65.81 |
23.29 |
-5.24 |
0.22 |
8.46 |
| rRNA |
3DW7 |
2649!A:2671!A |
C:G |
WC [cWW][XIX] |
10.55 |
54.98; 53.56 |
1.42 |
-12.74 |
0.43 |
21.35 |
| rRNA |
3DW7 |
2650!A:2670!A |
U:A |
WC [cWW][XX] |
10.68 |
51.59; 55.16 |
3.57 |
-11.71 |
0.29 |
14.35 |
| rRNA |
3DW7 |
2651!A:2669!A |
C:G |
WC [cWW][XIX] |
10.51 |
57.62; 55.21 |
2.41 |
-13.79 |
0.33 |
18.65 |
| rRNA |
3DW7 |
2652!A:2668!A |
C:G |
WC [cWW][XIX] |
10.78 |
54.21; 50.02 |
4.19 |
-14.83 |
0.39 |
17.15 |
| rRNA |
3DW7 |
2653!A:2667!A |
U:C |
sWC [---][-] |
10.77 |
80.82; 15.82 |
65.0 |
-4.1 |
0.28 |
17.24 |
| rRNA |
3DW7 |
2654!A:2666!A |
A:C |
rS* [tHH][-] |
12.55 |
12.33; 38.69 |
26.36 |
-58.1 |
1.39 |
27.0 |
| rRNA |
3DW7 |
2655!A:2665!A |
G:A |
S(bp:N2-O2P)_3 [---][-] |
10.93 |
90.2; 59.0 |
31.2 |
-171.76 |
0.56 |
16.97 |
| rRNA |
3DW7 |
2655!A:2656!A |
G:U |
pS* [cHS][-] |
6.58 |
149.3; 51.59 |
97.71 |
17.91 |
0.47 |
7.37 |
| rRNA |
3DW7 |
2656!A:2665!A |
U:A |
rH_1 [tWH][XXIV] |
9.58 |
31.3; 22.34 |
8.95 |
178.54 |
0.71 |
17.77 |
| rRNA |
3DW7 |
2657!A:2664!A |
A:G |
S [tSH][XI] |
9.45 |
8.46; 99.26 |
90.79 |
-3.82 |
0.11 |
4.26 |
| rRNA |
3DW7 |
2658!A:2663!A |
C:G |
WC [cWW][XIX] |
10.59 |
56.22; 55.68 |
0.54 |
2.81 |
0.19 |
6.82 |
| rRNA |
3DW7 |
2659!A:2662!A |
G:A |
S [tSH][XI] |
9.25 |
99.34; 13.01 |
86.32 |
-110.37 |
0.64 |
18.83 |