Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3E5E BPC Identified: 25 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3E5E 1!A:53!A G:U Wb [cWW][XXVIII] 10.54 39.18; 63.98 24.8 -7.69 0.23 7.88
Riboswitch 3E5E 2!A:52!A U:A WC [cWW][XX] 10.4 54.12; 54.42 0.3 -11.93 0.23 17.89
Riboswitch 3E5E 3!A:51!A U:A WC [cWW][XX] 10.38 54.44; 57.3 2.86 -9.2 0.05 10.01
Riboswitch 3E5E 4!A:50!A C:G WC [cWW][XIX] 10.55 54.72; 55.18 0.45 -9.23 0.24 14.95
Riboswitch 3E5E 5!A:49!A C:G WC [cWW][XIX] 10.54 53.77; 54.84 1.07 -4.29 0.38 9.33
Riboswitch 3E5E 6!A:48!A C:G WC [cWW][XIX] 10.49 54.68; 51.4 3.27 -1.78 0.27 11.29
Riboswitch 3E5E 8!A:36!A A:G S [tSH][XI] 8.51 21.57; 107.04 85.47 -35.01 0.36 31.77
Riboswitch 3E5E 9!A:35!A A:U WC [cWW][XX] 10.07 55.38; 59.58 4.19 -0.44 0.34 10.14
Riboswitch 3E5E 10!A:34!A A:U WC [cWW][XX] 10.48 52.45; 53.89 1.44 0.23 0.35 5.14
Riboswitch 3E5E 11!A:33!A G:C WC [cWW][XIX] 10.65 55.87; 54.03 1.84 0.49 0.13 7.79
Riboswitch 3E5E 12!A:32!A G:C WC [cWW][XIX] 10.74 56.14; 54.81 1.34 -3.7 0.16 4.65
Riboswitch 3E5E 13!A:28!A A:G WC [cWW][VIII] 12.98 46.91; 45.2 1.71 -13.98 0.2 19.26
Riboswitch 3E5E 14!A:27!A U:A WC [cWW][XX] 10.52 61.67; 49.44 12.22 -12.09 0.3 12.6
Riboswitch 3E5E 15!A:26!A G:C Wb [---][-] 10.17 50.98; 66.45 15.47 -15.18 0.56 14.86
Riboswitch 3E5E 16!A:25!A G:C WC [cWW][XIX] 10.36 49.5; 61.48 11.99 -8.73 0.11 11.14
Riboswitch 3E5E 17!A:24!A C:G WC [cWW][XIX] 11.02 49.42; 49.34 0.07 -9.82 0.03 12.62
Riboswitch 3E5E 18!A:23!A G:C WC [cWW][XIX] 10.8 52.99; 51.65 1.34 -2.82 0.15 2.35
Riboswitch 3E5E 19!A:22!A G:A S [tSH][XI] 9.39 93.77; 9.19 84.57 -79.56 0.0 18.56
Riboswitch 3E5E 19!A:21!A G:A S(sb:O2*-N7) [---][-] 7.59 84.55; 34.19 50.36 -175.61 1.93 24.65
Riboswitch 3E5E 31!A:36!A G:G rH_1 [tWH][VII] 11.16 31.07; 25.59 5.48 -147.66 0.06 16.22
Riboswitch 3E5E 38!A:48!A A:G fS [tSW][X] 10.33 12.26; 97.82 85.57 -101.92 1.81 53.71
Riboswitch 3E5E 39!A:48!A A:G fS(sb:O2*-N1)_1 [---][-] 8.77 41.77; 102.79 61.02 -148.56 0.22 46.01
Riboswitch 3E5E 40!A:47!A C:G WC [cWW][XIX] 10.5 54.87; 52.72 2.15 -1.1 0.1 10.62
Riboswitch 3E5E 41!A:46!A C:G WC [cWW][XIX] 10.66 51.13; 50.22 0.91 3.26 0.04 3.75
Riboswitch 3E5E 42!A:45!A G:A S [tSH][XI] 10.49 81.68; 19.87 61.81 -148.6 0.77 8.45