Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3EPL BPC Identified: 52 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 3EPL 2!E:71!E C:G WC [cWW][XIX] 10.73 53.87; 52.82 1.05 -7.08 0.22 10.04
tRNA 3EPL 5!E:68!E G:C Wb [---][-] 10.58 44.16; 59.9 15.74 -11.48 0.47 25.36
tRNA 3EPL 6!E:67!E U:G WC [---][-] 10.23 60.46; 56.6 3.86 -13.5 0.19 29.86
tRNA 3EPL 7!E:66!E A:U WC [cWW][XX] 10.54 52.91; 56.09 3.18 -23.78 0.05 25.18
tRNA 3EPL 8!E:48!E U:C rpS [cSS][-] 4.59 138.83; 105.89 32.94 38.26 0.83 11.83
tRNA 3EPL 8!E:14!E U:A rH_1 [tWH][XXIV] 10.25 23.98; 9.99 13.99 -147.64 0.33 27.0
tRNA 3EPL 9!E:23!E G:C rS*_1 [tHH][-] 12.16 10.86; 5.91 4.95 -141.92 0.86 18.22
tRNA 3EPL 10!E:25!E G:C WC [cWW][XIX] 10.68 52.74; 55.15 2.41 -1.56 0.32 9.95
tRNA 3EPL 11!E:24!E C:G WC [cWW][XIX] 10.85 55.01; 54.06 0.95 0.0 0.03 0.45
tRNA 3EPL 12!E:23!E G:C WC [cWW][XIX] 10.82 52.54; 56.97 4.43 -1.91 0.35 11.93
tRNA 3EPL 13!E:22!E C:G WC [cWW][XIX] 10.84 53.01; 50.78 2.23 -2.7 0.22 5.26
tRNA 3EPL 15!E:48!E G:C rWb [tWW][XXII] 11.06 50.47; 48.11 2.36 156.31 0.24 25.87
tRNA 3EPL 16!E:59!E U:U rWC [---][-] 9.22 27.94; 35.9 7.95 -166.06 1.25 36.82
tRNA 3EPL 27!E:43!E G:U WC [---][-] 10.29 52.95; 69.77 16.81 -10.48 0.52 16.84
tRNA 3EPL 28!E:42!E C:G WC [cWW][XIX] 10.43 55.95; 58.33 2.38 -13.27 0.15 35.66
tRNA 3EPL 29!E:41!E A:U WC [cWW][XX] 9.91 65.78; 61.79 3.99 -3.69 0.23 12.56
tRNA 3EPL 30!E:40!E G:C WC [cWW][XIX] 10.4 54.98; 61.42 6.44 6.22 0.18 15.71
tRNA 3EPL 31!E:39!E A:U WC [cWW][XX] 10.01 64.12; 58.51 5.61 0.33 0.58 16.28
tRNA 3EPL 32!E:38!E U:A sWC [---][-] 11.12 81.98; 26.0 55.97 6.7 0.41 17.86
tRNA 3EPL 49!E:65!E C:G WC [cWW][XIX] 10.8 54.53; 53.35 1.18 -5.71 0.19 11.77
tRNA 3EPL 50!E:64!E U:A WC [cWW][XX] 10.33 57.39; 59.86 2.46 -10.36 0.59 21.83
tRNA 3EPL 51!E:63!E U:G WC [---][-] 10.56 58.69; 54.07 4.62 -5.29 0.11 12.03
tRNA 3EPL 52!E:62!E A:U WC [cWW][XX] 10.69 54.56; 56.24 1.69 0.49 0.17 3.49
tRNA 3EPL 53!E:61!E G:C WC [cWW][XIX] 10.87 54.37; 52.95 1.42 -9.15 0.04 12.13
tRNA 3EPL 54!E:58!E U:A rH_1 [tWH][XXIV] 10.39 32.51; 16.23 16.28 -171.91 0.96 36.82
tRNA 3EPL 3!F:70!F U:A WC [cWW][XX] 10.67 52.66; 65.15 12.48 10.5 0.02 14.54
tRNA 3EPL 4!F:69!F C:G WC [cWW][XIX] 11.58 50.15; 53.59 3.44 -1.74 0.28 11.45
tRNA 3EPL 5!F:68!F G:C WC [cWW][XIX] 10.85 50.84; 53.78 2.93 -4.08 0.64 15.33
tRNA 3EPL 7!F:66!F A:U WC [cWW][XX] 10.57 50.08; 54.0 3.92 -32.08 1.1 20.75
tRNA 3EPL 8!F:21!F U:A fS(sb:O2*-N1) [tSW][-] 8.92 104.51; 44.43 60.09 151.04 0.93 31.66
tRNA 3EPL 8!F:14!F U:A rH_1 [tWH][XXIV] 9.15 29.89; 31.53 1.65 -175.29 0.13 6.71
tRNA 3EPL 9!F:23!F G:C rS*_2 [---][-] 12.42 9.51; 6.14 3.37 -91.29 0.72 25.1
tRNA 3EPL 10!F:25!F G:C WC [cWW][XIX] 10.26 56.97; 60.43 3.46 -2.72 0.79 15.22
tRNA 3EPL 11!F:24!F C:G WC [cWW][XIX] 10.64 56.53; 53.63 2.9 -1.78 0.8 18.62
tRNA 3EPL 12!F:23!F G:C WC [cWW][XIX] 10.59 56.93; 57.1 0.16 -6.31 0.19 12.87
tRNA 3EPL 13!F:22!F C:G WC [cWW][XIX] 10.81 49.77; 51.05 1.28 -19.14 0.22 19.04
tRNA 3EPL 15!F:48!F G:C srWC [---][-] 10.6 42.08; 74.76 32.68 161.82 0.84 28.11
tRNA 3EPL 16!F:59!F U:U rWb [tWW][XIII] 9.06 27.82; 47.12 19.3 -167.63 0.11 16.16
tRNA 3EPL 18!F:55!F G:U fS_1 [tSW][-] 9.75 38.16; 97.05 58.89 -113.84 0.2 48.85
tRNA 3EPL 22!F:46!F G:G rH_1 [tWH][VII] 11.29 35.46; 36.82 1.37 -177.11 0.17 9.98
tRNA 3EPL 27!F:43!F G:U WC [---][-] 10.57 50.81; 64.22 13.4 -1.42 0.51 12.65
tRNA 3EPL 28!F:42!F C:G WC [cWW][XIX] 10.45 58.83; 58.04 0.79 -1.31 0.07 25.49
tRNA 3EPL 29!F:41!F A:U WC [cWW][XX] 10.06 61.68; 61.6 0.08 6.62 0.02 14.61
tRNA 3EPL 30!F:40!F G:C WC [cWW][XIX] 10.57 55.49; 60.19 4.71 5.86 0.1 11.13
tRNA 3EPL 31!F:39!F A:U WC [cWW][XX] 10.35 57.98; 59.31 1.33 7.43 0.28 13.19
tRNA 3EPL 32!F:38!F U:A sWC [---][-] 11.26 83.52; 19.13 64.39 3.95 0.13 26.86
tRNA 3EPL 33!F:36!F U:A pS(ps:O1P-N6) [---][-] 12.71 121.85; 32.11 89.74 -96.08 1.35 70.06
tRNA 3EPL 49!F:65!F C:G WC [cWW][XIX] 10.53 50.61; 58.19 7.58 -15.22 1.44 41.97
tRNA 3EPL 50!F:64!F U:A WC [cWW][XX] 11.59 51.99; 46.33 5.65 7.65 0.05 15.03
tRNA 3EPL 52!F:62!F A:U WC [cWW][XX] 10.94 61.72; 57.0 4.73 -4.32 0.15 8.84
tRNA 3EPL 53!F:61!F G:C WC [cWW][XIX] 11.43 46.07; 45.96 0.11 6.3 0.18 4.52
tRNA 3EPL 55!F:58!F U:A rH_1 [tWH][XXIV] 9.13 54.51; 34.84 19.67 -78.2 2.29 41.4