Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3F2T BPC Identified: 53 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3F2T 1!X:112!X G:C WC [cWW][XIX] 10.55 55.97; 55.5 0.47 2.08 0.6 16.9
Riboswitch 3F2T 2!X:111!X G:U Wb [cWW][XXVIII] 10.03 53.29; 69.06 15.77 -16.83 0.19 22.89
Riboswitch 3F2T 3!X:110!X A:U WC [cWW][XX] 9.85 67.9; 61.37 6.53 -16.0 0.2 21.0
Riboswitch 3F2T 4!X:109!X U:A WC [cWW][XX] 9.77 65.73; 61.19 4.54 -14.13 0.13 20.08
Riboswitch 3F2T 5!X:108!X C:G Wb [---][-] 10.27 69.91; 50.27 19.64 -11.22 0.2 12.97
Riboswitch 3F2T 6!X:107!X U:A WC [cWW][XX] 10.47 60.55; 54.33 6.22 -15.31 0.38 20.5
Riboswitch 3F2T 7!X:106!X U:A WC [cWW][XX] 10.99 49.54; 57.96 8.41 10.22 0.44 32.35
Riboswitch 3F2T 8!X:105!X C:G WC [cWW][XIX] 10.41 58.13; 57.24 0.89 -11.5 0.16 14.9
Riboswitch 3F2T 9!X:104!X G:A S [tSH][XI] 9.57 91.23; 4.99 86.23 -102.14 2.53 54.47
Riboswitch 3F2T 11!X:31!X G:C rpS [cSS][-] 5.06 102.85; 156.51 53.66 -28.3 0.04 30.18
Riboswitch 3F2T 12!X:93!X G:G rS [tSS][IV] 8.57 60.99; 78.65 17.66 159.01 0.87 55.79
Riboswitch 3F2T 13!X:28!X C:G pfS [cSW][-] 9.25 99.01; 56.27 42.74 -13.18 0.03 23.97
Riboswitch 3F2T 14!X:28!X A:G S [tSH][XI] 9.9 8.0; 100.66 92.66 -49.56 1.02 21.9
Riboswitch 3F2T 15!X:27!X G:C WC [cWW][XIX] 10.68 57.35; 59.24 1.9 -1.84 0.06 5.6
Riboswitch 3F2T 16!X:26!X G:C WC [cWW][XIX] 10.54 55.04; 57.77 2.73 -6.81 0.01 14.06
Riboswitch 3F2T 17!X:25!X G:C WC [cWW][XIX] 10.78 54.43; 52.69 1.74 -1.1 0.92 24.65
Riboswitch 3F2T 18!X:22!X U:A rH_1 [tWH][XXIV] 10.06 36.13; 14.72 21.41 -175.15 0.48 16.81
Riboswitch 3F2T 19!X:90!X G:A S [tSH][XI] 9.35 99.02; 6.86 92.16 -27.02 0.67 26.02
Riboswitch 3F2T 19!X:21!X G:A S(sb:O2*-N7) [---][-] 7.37 81.39; 34.81 46.58 -164.44 1.7 32.76
Riboswitch 3F2T 29!X:94!X A:U WC [cWW][XX] 10.72 53.51; 52.88 0.64 -5.27 0.62 26.27
Riboswitch 3F2T 30!X:93!X C:G WC [cWW][XIX] 10.73 56.58; 49.61 6.97 -22.45 0.11 25.9
Riboswitch 3F2T 31!X:84!X C:G WC [cWW][XIX] 10.57 61.36; 54.55 6.81 -19.4 0.81 28.32
Riboswitch 3F2T 32!X:83!X G:C WC [cWW][XIX] 10.89 54.62; 49.76 4.86 -17.44 0.23 18.67
Riboswitch 3F2T 33!X:104!X G:A rS [tSS][-] 8.49 86.24; 61.93 24.31 165.99 0.41 18.19
Riboswitch 3F2T 33!X:46!X G:C WC [cWW][XIX] 10.74 53.36; 56.99 3.63 -11.73 0.05 14.7
Riboswitch 3F2T 34!X:105!X U:G rS(ss:O2*-O2*)_2 [---][-] 5.35 164.35; 142.26 22.09 -135.92 0.35 28.04
Riboswitch 3F2T 34!X:45!X U:A WC [cWW][XX] 10.36 54.65; 61.44 6.79 -7.76 0.23 18.99
Riboswitch 3F2T 35!X:44!X G:C WC [cWW][XIX] 10.67 55.83; 53.77 2.06 -10.62 0.12 16.94
Riboswitch 3F2T 36!X:43!X G:C WC [cWW][XIX] 10.83 53.48; 51.77 1.71 -5.47 0.76 26.4
Riboswitch 3F2T 37!X:40!X U:A rH_1 [tWH][XXIV] 9.67 30.31; 21.06 9.25 -172.21 0.37 9.82
Riboswitch 3F2T 38!X:70!X A:G S [tSH][XI] 10.02 8.51; 95.05 86.53 -10.43 0.8 34.78
Riboswitch 3F2T 41!X:82!X G:C WC [cWW][XIX] 10.59 50.05; 55.94 5.89 -16.94 0.09 24.63
Riboswitch 3F2T 41!X:63!X G:A rS [tSS][-] 8.64 80.94; 56.73 24.21 157.6 1.28 42.69
Riboswitch 3F2T 42!X:81!X U:A WC [cWW][XX] 10.83 51.47; 50.96 0.51 -5.11 0.1 18.21
Riboswitch 3F2T 46!X:104!X C:A rpS(bs:O2-O2*) [cSS][-] 5.92 106.01; 148.24 42.24 -59.52 0.34 16.39
Riboswitch 3F2T 49!X:60!X A:U Wb [---][-] 10.87 36.21; 61.45 25.24 -1.3 0.08 12.74
Riboswitch 3F2T 50!X:59!X A:U WC [cWW][XX] 10.48 56.07; 57.88 1.81 -13.58 0.16 22.31
Riboswitch 3F2T 51!X:58!X G:C WC [cWW][XIX] 10.59 56.92; 50.7 6.22 -14.12 0.48 28.2
Riboswitch 3F2T 52!X:57!X U:G Wb [cWW][XXVIII] 10.19 70.48; 43.16 27.32 -11.13 0.15 17.78
Riboswitch 3F2T 62!X:83!X G:C rpS [cSS][-] 5.18 103.06; 150.88 47.81 -39.37 0.45 20.93
Riboswitch 3F2T 63!X:82!X A:C rpS(bs:O2-O2*) [cSS][-] 5.48 147.13; 109.73 37.4 -35.81 0.85 18.41
Riboswitch 3F2T 64!X:80!X U:A WC [cWW][XX] 10.11 58.38; 60.96 2.59 -3.37 0.57 13.78
Riboswitch 3F2T 65!X:79!X U:A WC [cWW][XX] 10.46 59.53; 59.17 0.36 -10.68 0.04 12.59
Riboswitch 3F2T 66!X:78!X U:A WC [cWW][XX] 10.56 53.94; 55.19 1.25 -7.48 0.36 6.02
Riboswitch 3F2T 67!X:77!X G:C WC [cWW][XIX] 10.68 57.01; 54.09 2.92 -13.26 0.36 21.07
Riboswitch 3F2T 68!X:76!X G:C WC [cWW][XIX] 10.88 55.7; 49.07 6.63 -0.9 0.44 15.02
Riboswitch 3F2T 69!X:73!X U:A rH_1 [tWH][XXIV] 10.52 33.53; 11.36 22.18 -156.18 0.54 19.66
Riboswitch 3F2T 70!X:72!X G:A S(sb:O2*-N7) [---][-] 7.08 81.98; 32.19 49.79 -156.63 0.95 35.59
Riboswitch 3F2T 85!X:98!X A:G WC [cWW][VIII] 12.79 47.83; 46.66 1.17 -12.67 0.15 22.04
Riboswitch 3F2T 86!X:97!X C:G WC [cWW][XIX] 10.54 55.06; 55.57 0.51 -14.24 0.43 25.57
Riboswitch 3F2T 87!X:96!X A:U WC [cWW][XX] 10.16 60.83; 56.28 4.55 -18.96 0.4 28.84
Riboswitch 3F2T 88!X:95!X G:C WC [cWW][XIX] 10.67 57.27; 53.84 3.43 -14.69 1.14 35.47
Riboswitch 3F2T 89!X:92!X U:A rH_1 [tWH][XXIV] 9.4 33.45; 20.35 13.1 -163.52 0.13 11.05