Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3F2X BPC Identified: 54 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3F2X 1!X:112!X G:C WC [cWW][XIX] 10.87 49.22; 53.84 4.62 -5.68 2.51 13.63
Riboswitch 3F2X 2!X:111!X G:U Wb [cWW][XXVIII] 10.34 46.0; 63.66 17.66 -12.97 0.04 16.73
Riboswitch 3F2X 3!X:110!X A:U WC [cWW][XX] 10.41 53.5; 62.5 8.99 -18.39 0.25 24.08
Riboswitch 3F2X 4!X:109!X U:A WC [cWW][XX] 10.4 58.43; 52.5 5.93 -15.31 0.41 17.76
Riboswitch 3F2X 5!X:108!X C:G Wb [---][-] 10.41 70.34; 54.17 16.18 -14.77 0.18 18.31
Riboswitch 3F2X 6!X:107!X U:A WC [cWW][XX] 10.55 60.46; 51.7 8.76 -11.43 0.2 14.86
Riboswitch 3F2X 7!X:106!X U:A WC [cWW][XX] 11.16 45.55; 50.64 5.09 17.14 0.31 30.13
Riboswitch 3F2X 8!X:105!X C:G WC [cWW][XIX] 10.46 56.33; 53.58 2.75 -13.18 0.21 16.67
Riboswitch 3F2X 9!X:104!X G:A S [tSH][XI] 9.72 95.03; 6.16 88.87 -54.28 2.3 45.8
Riboswitch 3F2X 10!X:47!X G:G H_3 [---][-] 11.96 28.52; 89.91 61.39 28.82 0.67 36.57
Riboswitch 3F2X 11!X:31!X G:C rpS [cSS][-] 5.28 97.64; 154.34 56.7 -27.5 0.11 34.79
Riboswitch 3F2X 12!X:93!X G:G rS [tSS][IV] 8.44 62.05; 79.54 17.48 162.68 0.37 46.79
Riboswitch 3F2X 13!X:28!X C:G pfS [cSW][-] 9.33 100.1; 54.24 45.86 -14.84 0.33 17.18
Riboswitch 3F2X 14!X:28!X A:G S [tSH][XI] 9.85 8.36; 98.5 90.14 -34.07 0.86 16.74
Riboswitch 3F2X 15!X:27!X G:C WC [cWW][XIX] 10.55 52.81; 57.91 5.1 -6.42 0.0 9.08
Riboswitch 3F2X 16!X:26!X G:C WC [cWW][XIX] 10.58 55.15; 56.8 1.65 -6.0 0.06 13.51
Riboswitch 3F2X 17!X:25!X G:C WC [cWW][XIX] 10.85 48.47; 51.82 3.34 -3.08 0.83 20.39
Riboswitch 3F2X 18!X:22!X U:A rH_1 [tWH][XXIV] 9.93 34.21; 17.03 17.18 -174.32 0.19 14.82
Riboswitch 3F2X 19!X:90!X G:A S [tSH][XI] 9.43 101.1; 8.45 92.65 -15.4 0.94 30.9
Riboswitch 3F2X 19!X:21!X G:A S(sb:O2*-N7) [---][-] 7.26 79.09; 34.56 44.52 -163.17 2.02 31.25
Riboswitch 3F2X 29!X:94!X A:U WC [cWW][XX] 10.71 51.62; 50.4 1.23 -6.88 0.49 18.09
Riboswitch 3F2X 30!X:93!X C:G WC [cWW][XIX] 10.62 56.67; 49.26 7.41 -18.86 0.21 22.39
Riboswitch 3F2X 31!X:84!X C:G WC [cWW][XIX] 10.66 56.43; 50.94 5.49 -19.86 0.57 27.84
Riboswitch 3F2X 32!X:83!X G:C WC [cWW][XIX] 10.97 50.76; 51.46 0.7 -12.91 0.02 13.59
Riboswitch 3F2X 33!X:104!X G:A rS [tSS][-] 8.58 82.97; 66.72 16.25 170.16 0.47 9.44
Riboswitch 3F2X 33!X:46!X G:C WC [cWW][XIX] 10.7 50.32; 52.82 2.5 -8.35 0.3 12.93
Riboswitch 3F2X 34!X:105!X U:G rS(ss:O2*-O2*)_2 [---][-] 5.57 166.76; 145.64 21.12 -147.64 0.42 24.81
Riboswitch 3F2X 34!X:45!X U:A WC [cWW][XX] 10.1 57.7; 68.02 10.32 -12.43 0.05 21.94
Riboswitch 3F2X 35!X:44!X G:C WC [cWW][XIX] 10.78 54.78; 51.34 3.44 -9.71 0.5 19.46
Riboswitch 3F2X 36!X:43!X G:C WC [cWW][XIX] 10.6 54.57; 51.41 3.16 -9.81 0.63 27.37
Riboswitch 3F2X 37!X:40!X U:A rH_1 [tWH][XXIV] 9.44 33.48; 22.97 10.51 -172.1 0.46 4.32
Riboswitch 3F2X 38!X:70!X A:G S [tSH][XI] 9.81 8.11; 98.14 90.03 -7.33 1.01 33.32
Riboswitch 3F2X 41!X:82!X G:C WC [cWW][XIX] 10.55 50.45; 57.52 7.08 -16.62 0.11 22.14
Riboswitch 3F2X 41!X:63!X G:A rS [tSS][-] 8.39 82.84; 56.88 25.97 161.49 0.64 36.53
Riboswitch 3F2X 42!X:81!X U:A WC [cWW][XX] 10.87 52.64; 51.58 1.06 -5.74 0.11 17.92
Riboswitch 3F2X 46!X:104!X C:A rpS(bs:O2-O2*) [cSS][-] 5.86 103.81; 153.55 49.74 -56.62 0.45 13.56
Riboswitch 3F2X 49!X:60!X A:U Wb [---][-] 11.03 40.89; 66.39 25.5 -4.21 0.12 8.99
Riboswitch 3F2X 50!X:59!X A:U WC [cWW][XX] 10.69 58.88; 54.68 4.2 -12.57 0.11 16.46
Riboswitch 3F2X 51!X:58!X G:C WC [cWW][XIX] 10.75 57.64; 54.1 3.54 -17.3 0.4 25.58
Riboswitch 3F2X 52!X:57!X U:G Wb [cWW][XXVIII] 10.51 67.95; 48.36 19.59 -13.89 0.08 18.7
Riboswitch 3F2X 62!X:83!X G:C rpS [cSS][-] 5.39 100.42; 151.65 51.24 -36.89 0.21 22.63
Riboswitch 3F2X 63!X:82!X A:C rpS(bs:O2-O2*) [cSS][-] 5.69 148.84; 109.08 39.76 -34.59 1.73 15.08
Riboswitch 3F2X 64!X:80!X U:A WC [cWW][XX] 10.11 58.18; 59.27 1.1 -0.41 0.25 1.94
Riboswitch 3F2X 65!X:79!X U:A WC [cWW][XX] 10.69 50.88; 55.7 4.83 -12.17 0.1 19.66
Riboswitch 3F2X 66!X:78!X U:A WC [cWW][XX] 10.62 53.44; 53.72 0.28 -8.26 0.21 12.87
Riboswitch 3F2X 67!X:77!X G:C WC [cWW][XIX] 10.51 55.5; 55.09 0.41 -9.65 0.13 13.62
Riboswitch 3F2X 68!X:76!X G:C WC [cWW][XIX] 10.94 57.56; 47.6 9.96 -3.0 0.51 15.77
Riboswitch 3F2X 69!X:73!X U:A rH_1 [tWH][XXIV] 10.65 34.01; 11.01 23.0 -161.85 0.21 8.6
Riboswitch 3F2X 70!X:72!X G:A S(sb:O2*-N7) [---][-] 7.04 82.61; 38.52 44.09 -161.61 1.27 32.92
Riboswitch 3F2X 85!X:98!X A:G WC [cWW][VIII] 12.86 44.31; 47.86 3.55 -7.06 0.09 14.39
Riboswitch 3F2X 86!X:97!X C:G WC [cWW][XIX] 10.54 56.47; 52.45 4.02 -14.22 0.72 23.69
Riboswitch 3F2X 87!X:96!X A:U WC [cWW][XX] 10.26 60.05; 54.79 5.26 -17.02 0.35 19.86
Riboswitch 3F2X 88!X:95!X G:C WC [cWW][XIX] 10.77 53.25; 51.97 1.29 -15.42 0.95 29.75
Riboswitch 3F2X 89!X:92!X U:A rH_1 [tWH][XXIV] 9.46 35.1; 20.4 14.7 -165.18 0.37 7.71