| RNA | PDB | Position | bp | bpC; LG [LW][Sanger] | dCC | <X ; <Y | |<X - <Y| | Torsion | Z-Diff | Buckle |
| Riboswitch | 3FO6 | 15!A:81!A | G:C | WC [cWW][XIX] | 10.82 | 51.3; 52.03 | 0.74 | -12.86 | 0.33 | 12.65 |
| Riboswitch | 3FO6 | 16!A:80!A | G:C | WC [cWW][XIX] | 10.76 | 53.44; 53.68 | 0.23 | -7.25 | 0.07 | 10.13 |
| Riboswitch | 3FO6 | 17!A:79!A | A:U | WC [cWW][XX] | 10.51 | 55.81; 55.35 | 0.46 | -10.88 | 0.05 | 17.03 |
| Riboswitch | 3FO6 | 18!A:78!A | C:G | WC [cWW][XIX] | 10.7 | 53.15; 55.48 | 2.32 | -8.74 | 0.06 | 15.49 |
| Riboswitch | 3FO6 | 19!A:77!A | A:U | WC [cWW][XX] | 10.33 | 59.03; 58.44 | 0.59 | -5.39 | 0.16 | 12.05 |
| Riboswitch | 3FO6 | 20!A:76!A | U:A | WC [cWW][XX] | 10.26 | 59.92; 56.28 | 3.63 | -11.73 | 0.49 | 19.5 |
| Riboswitch | 3FO6 | 21!A:75!A | A:U | WC [cWW][XX] | 10.62 | 57.03; 55.21 | 1.82 | -0.82 | 0.18 | 5.73 |
| Riboswitch | 3FO6 | 22!A:52!A | U:A | WC [cWW][XX] | 10.46 | 57.23; 55.78 | 1.44 | 2.71 | 0.52 | 15.61 |
| Riboswitch | 3FO6 | 23!A:46!A | A:G | fS [tSW][X] | 9.39 | 4.87; 116.91 | 112.04 | 157.39 | 0.28 | 4.65 |
| Riboswitch | 3FO6 | 24!A:53!A | A:C | rpS(ss:O2*-O2*)_1 [cSS][-] | 5.39 | 147.46; 137.23 | 10.23 | -115.14 | 2.64 | 40.68 |
| Riboswitch | 3FO6 | 25!A:45!A | U:A | WC [cWW][XX] | 10.3 | 57.31; 59.09 | 1.79 | -10.38 | 0.1 | 12.55 |
| Riboswitch | 3FO6 | 26!A:44!A | C:A | Wb* [cWW][-] | 10.61 | 50.08; 66.65 | 16.57 | -5.49 | 0.12 | 12.71 |
| Riboswitch | 3FO6 | 27!A:43!A | G:C | WC [cWW][XIX] | 10.65 | 55.09; 56.27 | 1.18 | -2.4 | 0.26 | 7.08 |
| Riboswitch | 3FO6 | 28!A:42!A | C:G | WC [cWW][XIX] | 10.72 | 53.79; 55.62 | 1.83 | 2.8 | 0.11 | 6.96 |
| Riboswitch | 3FO6 | 29!A:41!A | G:C | WC [cWW][XIX] | 10.61 | 52.91; 55.42 | 2.51 | -7.23 | 0.03 | 10.71 |
| Riboswitch | 3FO6 | 30!A:40!A | U:A | WC [cWW][XX] | 10.38 | 57.07; 57.54 | 0.48 | -4.03 | 0.26 | 10.03 |
| Riboswitch | 3FO6 | 31!A:39!A | G:C | WC [cWW][XIX] | 10.56 | 55.46; 56.57 | 1.11 | -1.47 | 0.08 | 5.62 |
| Riboswitch | 3FO6 | 33!A:66!A | A:A | rH [tWH][V] | 12.41 | 22.14; 18.9 | 3.23 | 134.34 | 0.26 | 12.71 |
| Riboswitch | 3FO6 | 33!A:37!A | A:G | rpS(sb:O2*-N3) [---][-] | 5.32 | 101.36; 157.36 | 56.0 | -13.09 | 1.67 | 14.35 |
| Riboswitch | 3FO6 | 34!A:65!A | U:A | rH_1 [tWH][XXIV] | 9.67 | 31.56; 19.17 | 12.39 | 174.63 | 0.01 | 9.48 |
| Riboswitch | 3FO6 | 34!A:37!A | U:G | rpS [cSS][-] | 4.5 | 120.69; 100.99 | 19.69 | 123.38 | 1.49 | 28.31 |
| Riboswitch | 3FO6 | 35!A:64!A | A:A | rH [tWH][V] | 12.3 | 20.44; 21.2 | 0.77 | 170.65 | 0.28 | 2.34 |
| Riboswitch | 3FO6 | 37!A:61!A | G:C | WC [cWW][XIX] | 10.91 | 51.02; 53.4 | 2.38 | -13.36 | 0.4 | 8.5 |
| Riboswitch | 3FO6 | 38!A:66!A | G:A | fS [tSW][X] | 9.42 | 118.01; 25.25 | 92.76 | -89.94 | 0.33 | 33.61 |
| Riboswitch | 3FO6 | 38!A:60!A | G:C | WC [cWW][XIX] | 10.63 | 55.07; 56.26 | 1.19 | -7.68 | 0.84 | 25.35 |
| Riboswitch | 3FO6 | 46!A:53!A | G:C | WC [cWW][XIX] | 10.79 | 52.53; 53.84 | 1.31 | 3.11 | 0.69 | 15.36 |
| Riboswitch | 3FO6 | 49!A:76!A | U:A | pfS* [cWS][-] | 6.11 | 68.03; 125.65 | 57.62 | 30.23 | 1.28 | 29.08 |
| Riboswitch | 3FO6 | 50!A:75!A | C:U | pfS [cSW][-] | 7.66 | 41.6; 132.02 | 90.42 | -23.85 | 0.11 | 19.91 |
| Riboswitch | 3FO6 | 54!A:72!A | C:G | WC [cWW][XIX] | 10.6 | 56.5; 54.71 | 1.79 | -8.99 | 0.04 | 13.4 |
| Riboswitch | 3FO6 | 55!A:71!A | G:C | WC [cWW][XIX] | 10.79 | 52.91; 52.57 | 0.34 | -10.13 | 0.11 | 10.46 |
| Riboswitch | 3FO6 | 56!A:70!A | G:C | WC [cWW][XIX] | 10.9 | 51.68; 51.46 | 0.22 | -10.68 | 0.05 | 12.67 |
| Riboswitch | 3FO6 | 57!A:69!A | G:U | Wb [cWW][XXVIII] | 10.5 | 39.61; 65.02 | 25.41 | -12.69 | 0.02 | 13.32 |
| Riboswitch | 3FO6 | 58!A:68!A | C:G | WC [cWW][XIX] | 10.69 | 54.17; 53.18 | 0.99 | -9.31 | 0.24 | 16.05 |
| Riboswitch | 3FO6 | 59!A:67!A | A:U | WC [cWW][XX] | 10.51 | 56.48; 54.86 | 1.62 | -10.1 | 0.17 | 10.3 |
| Riboswitch | 3FO6 | 61!A:65!A | C:A | pfS [cSW][-] | 9.2 | 130.43; 41.44 | 88.99 | 20.92 | 0.23 | 15.14 |
| Riboswitch | 3FO6 | 62!A:63!A | G:U | pS* [cHS][-] | 6.89 | 145.99; 49.15 | 96.84 | 5.11 | 0.06 | 9.75 |