Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3FOZ BPC Identified: 67 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 3FOZ 1!C:72!C G:C WC [cWW][XIX] 10.73 51.07; 55.07 4.01 -7.77 0.09 11.98
tRNA 3FOZ 2!C:71!C C:G WC [cWW][XIX] 10.73 51.32; 54.73 3.41 -13.64 0.02 15.89
tRNA 3FOZ 3!C:70!C C:G WC [cWW][XIX] 10.76 53.18; 52.89 0.29 -10.46 0.03 14.58
tRNA 3FOZ 4!C:69!C C:G WC [cWW][XIX] 10.85 51.9; 53.68 1.79 -9.71 0.03 16.04
tRNA 3FOZ 5!C:68!C G:U WC [---][-] 10.8 54.95; 59.86 4.91 -12.05 0.33 12.91
tRNA 3FOZ 6!C:67!C G:C WC [cWW][XIX] 10.89 52.28; 52.84 0.56 -15.98 0.4 25.38
tRNA 3FOZ 7!C:66!C A:U WC [cWW][XX] 10.68 54.41; 54.61 0.2 -8.59 0.24 14.05
tRNA 3FOZ 8!C:21!C U:A fS(sb:O2*-N1) [tSW][-] 8.68 100.66; 47.77 52.89 169.56 1.07 24.78
tRNA 3FOZ 8!C:14!C U:A rH_1 [tWH][XXIV] 9.83 30.75; 19.13 11.62 -168.72 0.36 16.39
tRNA 3FOZ 9!C:23!C A:A rS* [tHH][-] 11.25 14.57; 7.58 6.99 142.86 0.54 10.3
tRNA 3FOZ 10!C:25!C G:C WC [cWW][XIX] 10.63 51.85; 57.14 5.29 -8.21 0.54 16.32
tRNA 3FOZ 11!C:24!C C:G WC [cWW][XIX] 10.59 57.01; 52.04 4.97 -9.92 0.48 18.94
tRNA 3FOZ 12!C:23!C U:A WC [cWW][XX] 10.75 51.53; 54.09 2.56 -11.15 0.18 16.12
tRNA 3FOZ 13!C:22!C C:G WC [cWW][XIX] 10.74 55.41; 50.63 4.78 5.16 0.01 5.59
tRNA 3FOZ 15!C:48!C G:C rWb [tWW][XXII] 10.76 35.5; 57.4 21.9 159.82 0.04 14.12
tRNA 3FOZ 16!C:59!C U:U rWb [tWW][XIII] 8.49 45.55; 45.0 0.55 170.58 0.99 22.55
tRNA 3FOZ 18!C:55!C G:U fS_1 [tSW][-] 8.51 28.77; 110.05 81.28 -127.97 0.03 26.37
tRNA 3FOZ 19!C:56!C G:C WC [cWW][XIX] 10.69 55.52; 52.18 3.34 -9.93 0.58 19.92
tRNA 3FOZ 22!C:46!C G:G rH_1 [tWH][VII] 11.37 32.2; 27.54 4.65 153.53 0.04 11.73
tRNA 3FOZ 26!C:44!C A:G H*_1 [cHW][-] 11.79 29.15; 31.25 2.1 -39.96 0.94 27.12
tRNA 3FOZ 27!C:43!C G:C WC [cWW][XIX] 10.77 53.99; 52.31 1.67 -5.76 0.1 6.24
tRNA 3FOZ 28!C:42!C G:C WC [cWW][XIX] 10.71 50.49; 54.78 4.29 -8.7 0.04 9.22
tRNA 3FOZ 29!C:41!C G:C WC [cWW][XIX] 10.77 51.91; 52.19 0.28 -4.45 0.15 8.06
tRNA 3FOZ 30!C:40!C G:C WC [cWW][XIX] 10.69 53.75; 53.66 0.09 -3.96 0.27 13.38
tRNA 3FOZ 31!C:39!C A:U WC [cWW][XX] 10.77 54.94; 52.18 2.76 -12.68 0.36 10.52
tRNA 3FOZ 32!C:38!C U:A sWC [---][-] 10.53 91.57; 32.93 58.64 -11.63 0.79 22.37
tRNA 3FOZ 32!C:36!C U:A fS(sb:O2*-N1) [tSW][-] 8.35 85.57; 51.46 34.11 -177.6 1.39 26.96
tRNA 3FOZ 33!C:36!C U:A pS(pb:O1P-N6) [---][-] 11.33 146.67; 29.76 116.91 -113.52 1.46 56.22
tRNA 3FOZ 49!C:65!C C:G WC [cWW][XIX] 10.83 53.23; 54.62 1.39 -4.62 0.27 12.9
tRNA 3FOZ 50!C:64!C U:A WC [cWW][XX] 10.69 51.6; 53.81 2.21 -9.96 0.09 18.15
tRNA 3FOZ 51!C:63!C U:G Wb [cWW][XXVIII] 10.54 64.25; 40.88 23.37 -10.96 0.29 12.34
tRNA 3FOZ 52!C:62!C G:C WC [cWW][XIX] 10.6 55.9; 53.84 2.06 -14.31 0.28 20.03
tRNA 3FOZ 53!C:61!C G:C WC [cWW][XIX] 10.87 55.02; 50.58 4.44 -3.08 0.8 18.92
tRNA 3FOZ 54!C:58!C U:A rH_1 [tWH][XXIV] 9.68 28.52; 21.79 6.73 166.97 0.34 12.74
tRNA 3FOZ 55!C:57!C U:G S(sb:O2*-N7)_1 [---][-] 6.61 80.07; 38.94 41.13 -166.23 1.14 34.3
tRNA 3FOZ 4!D:69!D C:G WC [cWW][XIX] 11.79 38.92; 49.66 10.74 6.65 0.15 5.44
tRNA 3FOZ 5!D:68!D G:C WC [cWW][XIX] 10.6 52.41; 54.7 2.29 -19.13 0.08 23.36
tRNA 3FOZ 6!D:67!D G:C WC [cWW][XIX] 10.93 56.68; 53.04 3.64 -12.27 0.81 29.94
tRNA 3FOZ 7!D:66!D A:U WC [cWW][XX] 10.68 53.5; 51.15 2.36 -7.05 0.35 5.32
tRNA 3FOZ 8!D:21!D U:A fS(sb:O2*-N1) [tSW][-] 8.05 100.95; 57.2 43.76 162.51 0.51 34.72
tRNA 3FOZ 8!D:14!D U:A rH_1 [tWH][XXIV] 9.55 30.56; 17.95 12.61 -176.85 0.18 17.86
tRNA 3FOZ 9!D:23!D A:A rS* [tHH][-] 11.27 12.88; 9.93 2.96 115.89 0.35 13.9
tRNA 3FOZ 10!D:25!D G:C WC [cWW][XIX] 10.62 53.37; 56.02 2.66 -3.9 0.64 17.17
tRNA 3FOZ 11!D:24!D C:G WC [cWW][XIX] 10.62 56.32; 51.46 4.86 -11.56 0.5 20.2
tRNA 3FOZ 12!D:23!D U:A WC [cWW][XX] 10.65 53.65; 53.66 0.01 -7.12 0.21 10.58
tRNA 3FOZ 13!D:22!D C:G WC [cWW][XIX] 10.61 57.42; 55.02 2.4 -1.08 0.02 4.27
tRNA 3FOZ 14!D:21!D A:A pfS [cSW][-] 10.3 30.04; 114.52 84.48 -16.33 0.61 20.02
tRNA 3FOZ 15!D:48!D G:C rWb [tWW][XXII] 10.63 33.78; 58.38 24.6 162.71 0.56 14.64
tRNA 3FOZ 16!D:59!D U:U rWb [tWW][XIII] 8.5 43.9; 45.33 1.43 175.77 0.66 14.57
tRNA 3FOZ 18!D:55!D G:U fS_1 [tSW][-] 8.69 27.29; 114.37 87.07 -131.32 0.06 24.48
tRNA 3FOZ 19!D:56!D G:C WC [cWW][XIX] 10.8 55.52; 52.93 2.59 -9.08 0.58 19.34
tRNA 3FOZ 22!D:46!D G:G rH_1 [tWH][VII] 11.47 31.19; 29.06 2.14 160.03 0.02 9.68
tRNA 3FOZ 26!D:44!D A:G rS* [tHH][-] 13.08 20.98; 17.56 3.42 20.78 0.14 13.59
tRNA 3FOZ 27!D:43!D G:C WC [cWW][XIX] 10.77 51.57; 54.13 2.56 -2.21 0.07 3.5
tRNA 3FOZ 28!D:42!D G:C WC [cWW][XIX] 10.76 52.73; 56.29 3.56 -3.43 0.19 7.96
tRNA 3FOZ 29!D:41!D G:C WC [cWW][XIX] 10.68 50.54; 52.25 1.71 -5.22 0.06 7.42
tRNA 3FOZ 30!D:40!D G:C WC [cWW][XIX] 10.55 52.94; 54.58 1.63 -5.83 0.43 17.02
tRNA 3FOZ 31!D:39!D A:U WC [cWW][XX] 10.45 56.79; 55.6 1.19 -11.59 0.04 9.62
tRNA 3FOZ 32!D:38!D U:A sWC [---][-] 10.5 96.83; 32.11 64.72 -17.67 0.42 19.37
tRNA 3FOZ 33!D:36!D U:A pS(ps:O1P-N6) [---][-] 11.45 144.78; 30.83 113.95 -116.47 1.91 58.56
tRNA 3FOZ 49!D:65!D C:G WC [cWW][XIX] 10.91 50.85; 50.34 0.52 -12.37 0.39 17.82
tRNA 3FOZ 50!D:64!D U:A H_1 [cWH][XXIII] 10.49 52.91; 30.79 22.12 -8.26 0.14 16.24
tRNA 3FOZ 51!D:63!D U:G Wb [cWW][XXVIII] 10.57 59.07; 39.7 19.37 -7.79 0.1 26.24
tRNA 3FOZ 52!D:62!D G:C WC [cWW][XIX] 10.92 50.06; 51.53 1.47 -14.03 0.14 16.37
tRNA 3FOZ 53!D:61!D G:C WC [cWW][XIX] 10.88 52.23; 49.14 3.09 -15.43 0.23 22.42
tRNA 3FOZ 54!D:58!D U:A rH_1 [tWH][XXIV] 9.39 36.49; 25.58 10.92 -179.58 0.16 5.07
tRNA 3FOZ 55!D:57!D U:G S(sb:O2*-N7)_1 [---][-] 6.61 84.39; 42.29 42.1 -169.07 1.92 34.14