Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3FTE
BPC Identified: 19
Ambiguities: 0
rRNA |
3FTE |
1507!C:1528!D |
A:U |
WC [cWW][XX] |
10.37 |
51.1; 60.67 |
9.57 |
-10.28 |
0.14 |
15.87 |
rRNA |
3FTE |
1508!C:1527!D |
A:U |
WC [cWW][XX] |
10.9 |
50.39; 55.47 |
5.08 |
-15.86 |
0.03 |
26.91 |
rRNA |
3FTE |
1509!C:1526!D |
C:G |
Wb [---][-] |
10.63 |
68.95; 49.59 |
19.36 |
-15.25 |
0.41 |
26.19 |
rRNA |
3FTE |
1510!C:1525!D |
C:G |
WC [cWW][XIX] |
10.75 |
45.88; 53.88 |
8.0 |
-16.68 |
0.16 |
20.62 |
rRNA |
3FTE |
1511!C:1524!D |
G:C |
WC [cWW][XIX] |
10.75 |
58.07; 56.13 |
1.94 |
-19.02 |
0.01 |
26.6 |
rRNA |
3FTE |
1512!C:1523!D |
U:G |
Wb [cWW][XXVIII] |
10.35 |
68.95; 39.63 |
29.32 |
-16.62 |
0.65 |
26.31 |
rRNA |
3FTE |
1513!C:1522!D |
A:U |
WC [cWW][XX] |
10.35 |
55.04; 57.37 |
2.32 |
-5.87 |
0.25 |
12.89 |
rRNA |
3FTE |
1514!C:1521!D |
G:C |
WC [cWW][XIX] |
10.99 |
51.49; 49.58 |
1.91 |
-5.88 |
0.08 |
9.34 |
rRNA |
3FTE |
1515!C:1520!D |
G:C |
WC [cWW][XIX] |
10.71 |
53.16; 57.3 |
4.14 |
-2.34 |
0.11 |
15.67 |
rRNA |
3FTE |
1516!C:1519!D |
G:A |
S [tSH][XI] |
9.82 |
92.49; 3.38 |
89.11 |
67.03 |
0.35 |
11.86 |
rRNA |
3FTE |
1519!C:1516!D |
A:G |
S [tSH][XI] |
9.79 |
12.56; 95.45 |
82.89 |
4.8 |
0.08 |
5.84 |
rRNA |
3FTE |
1520!C:1515!D |
C:G |
WC [cWW][XIX] |
10.6 |
56.59; 54.3 |
2.29 |
-4.01 |
0.19 |
19.86 |
rRNA |
3FTE |
1521!C:1514!D |
C:G |
WC [cWW][XIX] |
10.64 |
59.63; 49.25 |
10.38 |
-5.98 |
0.13 |
11.35 |
rRNA |
3FTE |
1522!C:1513!D |
U:A |
WC [cWW][XX] |
10.41 |
57.72; 51.9 |
5.81 |
-2.3 |
0.38 |
10.21 |
rRNA |
3FTE |
1523!C:1512!D |
G:U |
Wb [cWW][XXVIII] |
10.18 |
48.29; 71.11 |
22.82 |
-15.92 |
0.57 |
25.27 |
rRNA |
3FTE |
1524!C:1511!D |
C:G |
WC [cWW][XIX] |
10.9 |
55.21; 54.05 |
1.16 |
-13.82 |
0.33 |
21.47 |
rRNA |
3FTE |
1525!C:1510!D |
G:C |
WC [cWW][XIX] |
10.78 |
51.83; 50.59 |
1.23 |
-4.89 |
0.11 |
4.72 |
rRNA |
3FTE |
1526!C:1509!D |
G:C |
WC [cWW][XIX] |
10.84 |
52.57; 53.0 |
0.42 |
-9.39 |
0.31 |
18.96 |
rRNA |
3FTE |
1527!C:1508!D |
U:A |
WC [cWW][XX] |
10.6 |
50.7; 51.44 |
0.74 |
-11.34 |
0.3 |
32.37 |