Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3FTF
BPC Identified: 21
Ambiguities: 0
rRNA |
3FTF |
1507!C:1528!D |
A:U |
rH_1 [tWH][XXIV] |
9.87 |
21.1; 28.09 |
6.98 |
170.5 |
0.0 |
8.51 |
rRNA |
3FTF |
1508!C:1527!D |
A:U |
sWC [---][-] |
11.47 |
4.53; 63.98 |
59.45 |
46.05 |
0.29 |
22.55 |
rRNA |
3FTF |
1509!C:1526!D |
C:G |
WC [cWW][XIX] |
10.95 |
49.32; 51.64 |
2.32 |
-5.62 |
0.06 |
22.34 |
rRNA |
3FTF |
1510!C:1525!D |
C:G |
WC [cWW][XIX] |
10.72 |
51.25; 54.29 |
3.04 |
-6.94 |
0.19 |
16.91 |
rRNA |
3FTF |
1511!C:1524!D |
G:C |
WC [cWW][XIX] |
10.54 |
51.94; 54.25 |
2.31 |
-7.85 |
0.07 |
14.41 |
rRNA |
3FTF |
1512!C:1523!D |
U:G |
Wb [cWW][XXVIII] |
10.42 |
69.38; 39.31 |
30.07 |
-8.49 |
0.34 |
13.23 |
rRNA |
3FTF |
1513!C:1522!D |
A:U |
WC [cWW][XX] |
10.09 |
64.42; 57.85 |
6.57 |
-4.49 |
0.26 |
9.63 |
rRNA |
3FTF |
1514!C:1521!D |
G:C |
WC [cWW][XIX] |
10.61 |
51.48; 57.17 |
5.69 |
1.36 |
0.29 |
8.71 |
rRNA |
3FTF |
1515!C:1520!D |
G:C |
WC [cWW][XIX] |
10.71 |
56.39; 53.45 |
2.94 |
-0.68 |
0.11 |
13.54 |
rRNA |
3FTF |
1516!C:1519!D |
G:A |
S [tSH][XI] |
9.86 |
92.62; 5.84 |
86.78 |
10.42 |
0.03 |
3.5 |
rRNA |
3FTF |
1517!C:1518!D |
G:A |
S [tSH][XI] |
8.95 |
100.76; 6.3 |
94.46 |
-124.23 |
0.01 |
10.45 |
rRNA |
3FTF |
1518!C:1517!D |
A:G |
S [tSH][XI] |
8.97 |
13.28; 99.12 |
85.84 |
-48.59 |
0.23 |
18.58 |
rRNA |
3FTF |
1519!C:1516!D |
A:G |
S [tSH][XI] |
9.83 |
5.82; 95.82 |
89.99 |
0.73 |
0.29 |
8.65 |
rRNA |
3FTF |
1520!C:1515!D |
C:G |
WC [cWW][XIX] |
10.88 |
53.41; 57.55 |
4.14 |
-0.51 |
0.04 |
11.22 |
rRNA |
3FTF |
1521!C:1514!D |
C:G |
WC [cWW][XIX] |
10.75 |
47.9; 58.1 |
10.2 |
0.3 |
0.12 |
6.11 |
rRNA |
3FTF |
1522!C:1513!D |
U:A |
WC [cWW][XX] |
10.77 |
55.33; 53.73 |
1.6 |
-5.36 |
0.21 |
4.53 |
rRNA |
3FTF |
1523!C:1512!D |
G:U |
Wb [cWW][XXVIII] |
10.49 |
37.96; 68.58 |
30.62 |
-10.47 |
0.12 |
16.77 |
rRNA |
3FTF |
1524!C:1511!D |
C:G |
WC [cWW][XIX] |
10.89 |
50.9; 50.13 |
0.77 |
-9.11 |
0.46 |
21.08 |
rRNA |
3FTF |
1525!C:1510!D |
G:C |
WC [cWW][XIX] |
10.88 |
58.81; 48.11 |
10.7 |
-8.6 |
0.09 |
13.0 |
rRNA |
3FTF |
1526!C:1509!D |
G:C |
WC [cWW][XIX] |
10.82 |
53.8; 51.37 |
2.44 |
-7.59 |
0.34 |
23.8 |
rRNA |
3FTF |
1527!C:1508!D |
U:A |
WC [cWW][XX] |
10.94 |
48.04; 55.66 |
7.61 |
-8.23 |
0.39 |
13.0 |