Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3FU2
BPC Identified: 59
Ambiguities: 0
Riboswitch |
3FU2 |
1!A:22!A |
A:U |
WC [cWW][XX] |
10.47 |
49.38; 59.88 |
10.5 |
1.12 |
0.64 |
16.91 |
Riboswitch |
3FU2 |
2!A:21!A |
G:C |
WC [cWW][XIX] |
10.69 |
55.74; 52.12 |
3.62 |
-12.57 |
0.54 |
19.49 |
Riboswitch |
3FU2 |
3!A:25!A |
A:A |
pS [cSH][-] |
8.41 |
121.22; 11.42 |
109.8 |
-40.0 |
0.54 |
50.69 |
Riboswitch |
3FU2 |
3!A:20!A |
A:U |
WC [cWW][XX] |
10.33 |
57.1; 56.96 |
0.14 |
-11.77 |
0.22 |
11.42 |
Riboswitch |
3FU2 |
4!A:26!A |
G:A |
pS_1 [cSH][-] |
7.34 |
140.79; 19.14 |
121.65 |
-53.6 |
1.96 |
43.4 |
Riboswitch |
3FU2 |
4!A:19!A |
G:C |
WC [cWW][XIX] |
10.58 |
59.34; 56.15 |
3.19 |
-6.65 |
0.25 |
11.55 |
Riboswitch |
3FU2 |
5!A:28!A |
G:A |
fS [tSW][X] |
9.17 |
122.2; 8.4 |
113.8 |
100.71 |
0.05 |
12.71 |
Riboswitch |
3FU2 |
5!A:18!A |
G:C |
WC [cWW][XIX] |
10.64 |
54.21; 55.5 |
1.29 |
-6.36 |
0.23 |
10.14 |
Riboswitch |
3FU2 |
6!A:29!A |
U:A |
H_1 [cWH][XXIII] |
8.41 |
62.11; 47.09 |
15.01 |
-27.02 |
0.94 |
22.17 |
Riboswitch |
3FU2 |
7!A:30!A |
U:A |
H_1 [cWH][XXIII] |
8.86 |
55.0; 47.73 |
7.27 |
-1.76 |
0.3 |
10.06 |
Riboswitch |
3FU2 |
8!A:34!A |
C:A |
Wb* [cWW][-] |
11.56 |
38.28; 68.42 |
30.15 |
-3.84 |
0.14 |
23.25 |
Riboswitch |
3FU2 |
9!A:33!A |
U:A |
WC [cWW][XX] |
10.45 |
56.59; 54.51 |
2.08 |
-21.17 |
0.05 |
29.04 |
Riboswitch |
3FU2 |
10!A:32!A |
A:U |
WC [cWW][XX] |
9.99 |
64.16; 57.18 |
6.98 |
-16.75 |
0.49 |
19.09 |
Riboswitch |
3FU2 |
11!A:31!A |
G:C |
WC [cWW][XIX] |
10.64 |
52.62; 53.16 |
0.54 |
-22.84 |
0.27 |
27.34 |
Riboswitch |
3FU2 |
11!A:16!A |
G:A |
fS [tSW][X] |
9.4 |
117.59; 8.15 |
109.43 |
88.47 |
0.98 |
32.81 |
Riboswitch |
3FU2 |
18!A:29!A |
C:A |
pfS [cSW][-] |
9.21 |
127.99; 39.53 |
88.46 |
12.89 |
0.48 |
17.14 |
Riboswitch |
3FU2 |
19!A:27!A |
C:A |
pfS [cSW][-] |
9.23 |
122.59; 34.83 |
87.76 |
-17.67 |
0.12 |
19.57 |
Riboswitch |
3FU2 |
20!A:26!A |
U:A |
pfS [cSW][-] |
8.44 |
125.75; 46.09 |
79.65 |
9.3 |
1.69 |
49.31 |
Riboswitch |
3FU2 |
21!A:25!A |
C:A |
pfS [cSW][-] |
8.73 |
130.04; 44.75 |
85.3 |
19.43 |
1.71 |
36.32 |
Riboswitch |
3FU2 |
22!A:23!A |
U:A |
pS [cSH][-] |
6.36 |
144.2; 41.89 |
102.31 |
52.67 |
2.14 |
64.14 |
Riboswitch |
3FU2 |
1!B:22!B |
A:U |
WC [cWW][XX] |
10.45 |
53.57; 58.81 |
5.24 |
3.96 |
0.82 |
24.87 |
Riboswitch |
3FU2 |
2!B:24!B |
G:U |
S*_1 [tHS][-] |
11.54 |
98.43; 12.83 |
85.6 |
-22.06 |
0.7 |
50.67 |
Riboswitch |
3FU2 |
2!B:21!B |
G:C |
WC [cWW][XIX] |
10.44 |
59.3; 52.99 |
6.32 |
-12.13 |
0.51 |
20.17 |
Riboswitch |
3FU2 |
3!B:25!B |
A:A |
pS [cSH][-] |
8.39 |
120.63; 9.49 |
111.14 |
-52.4 |
0.25 |
53.26 |
Riboswitch |
3FU2 |
3!B:20!B |
A:U |
WC [cWW][XX] |
10.36 |
58.5; 55.03 |
3.47 |
-8.74 |
0.24 |
8.83 |
Riboswitch |
3FU2 |
4!B:26!B |
G:A |
pS_1 [cSH][-] |
7.69 |
139.25; 17.3 |
121.94 |
-57.99 |
2.02 |
39.67 |
Riboswitch |
3FU2 |
4!B:19!B |
G:C |
WC [cWW][XIX] |
10.8 |
56.68; 51.85 |
4.84 |
-2.66 |
0.05 |
4.7 |
Riboswitch |
3FU2 |
5!B:28!B |
G:A |
fS [tSW][X] |
9.59 |
117.7; 9.17 |
108.53 |
108.79 |
0.36 |
15.93 |
Riboswitch |
3FU2 |
5!B:18!B |
G:C |
WC [cWW][XIX] |
10.63 |
51.5; 56.01 |
4.52 |
-3.62 |
0.06 |
7.32 |
Riboswitch |
3FU2 |
6!B:29!B |
U:A |
H_1 [cWH][XXIII] |
8.44 |
63.85; 40.9 |
22.95 |
-20.93 |
0.6 |
21.87 |
Riboswitch |
3FU2 |
7!B:30!B |
U:A |
H_1 [cWH][XXIII] |
8.61 |
62.3; 46.96 |
15.34 |
-4.97 |
0.69 |
12.8 |
Riboswitch |
3FU2 |
8!B:34!B |
C:A |
Wb* [cWW][-] |
11.54 |
34.08; 66.92 |
32.84 |
-11.74 |
0.15 |
20.03 |
Riboswitch |
3FU2 |
9!B:33!B |
U:A |
WC [cWW][XX] |
10.53 |
54.22; 56.61 |
2.39 |
-22.84 |
0.04 |
29.66 |
Riboswitch |
3FU2 |
10!B:32!B |
A:U |
WC [cWW][XX] |
10.23 |
59.78; 54.91 |
4.88 |
-16.63 |
0.3 |
17.25 |
Riboswitch |
3FU2 |
11!B:31!B |
G:C |
WC [cWW][XIX] |
10.63 |
51.09; 53.46 |
2.38 |
-21.64 |
0.46 |
26.65 |
Riboswitch |
3FU2 |
11!B:16!B |
G:A |
fS [tSW][X] |
9.38 |
116.96; 5.62 |
111.34 |
159.39 |
0.9 |
19.55 |
Riboswitch |
3FU2 |
14!B:32!B |
A:U |
pfS [cSW][-] |
9.52 |
37.06; 127.6 |
90.55 |
-35.14 |
0.6 |
23.15 |
Riboswitch |
3FU2 |
18!B:29!B |
C:A |
pfS [cSW][-] |
9.05 |
130.39; 45.65 |
84.74 |
7.87 |
0.98 |
17.51 |
Riboswitch |
3FU2 |
19!B:27!B |
C:A |
pfS [cSW][-] |
9.71 |
118.26; 40.87 |
77.39 |
-19.12 |
0.07 |
20.25 |
Riboswitch |
3FU2 |
20!B:26!B |
U:A |
pfS [cSW][-] |
8.58 |
123.26; 44.97 |
78.28 |
8.67 |
1.58 |
41.58 |
Riboswitch |
3FU2 |
1!C:22!C |
A:U |
WC [cWW][XX] |
10.73 |
52.49; 56.72 |
4.22 |
-5.21 |
0.26 |
10.55 |
Riboswitch |
3FU2 |
2!C:21!C |
G:C |
WC [cWW][XIX] |
10.55 |
56.33; 52.42 |
3.91 |
-21.52 |
0.24 |
25.91 |
Riboswitch |
3FU2 |
3!C:25!C |
A:A |
pS [cSH][-] |
8.45 |
120.88; 10.23 |
110.65 |
-52.97 |
0.38 |
54.8 |
Riboswitch |
3FU2 |
3!C:20!C |
A:U |
WC [cWW][XX] |
10.29 |
59.51; 60.47 |
0.96 |
-12.34 |
0.45 |
10.36 |
Riboswitch |
3FU2 |
4!C:19!C |
G:C |
WC [cWW][XIX] |
10.57 |
53.28; 54.91 |
1.63 |
-6.97 |
0.19 |
9.95 |
Riboswitch |
3FU2 |
5!C:28!C |
G:A |
fS [tSW][X] |
9.5 |
117.2; 8.65 |
108.55 |
104.59 |
0.03 |
13.22 |
Riboswitch |
3FU2 |
5!C:18!C |
G:C |
WC [cWW][XIX] |
10.79 |
50.05; 56.56 |
6.51 |
-8.86 |
0.3 |
12.57 |
Riboswitch |
3FU2 |
6!C:29!C |
U:A |
H_1 [cWH][XXIII] |
8.56 |
60.93; 42.79 |
18.15 |
-18.57 |
0.75 |
16.81 |
Riboswitch |
3FU2 |
7!C:30!C |
U:A |
H_1 [cWH][XXIII] |
8.94 |
57.04; 45.89 |
11.15 |
-4.45 |
0.05 |
10.04 |
Riboswitch |
3FU2 |
8!C:34!C |
C:A |
Wb* [cWW][-] |
11.99 |
32.98; 59.17 |
26.18 |
-10.88 |
0.59 |
32.46 |
Riboswitch |
3FU2 |
9!C:33!C |
U:A |
WC [cWW][XX] |
10.75 |
53.05; 54.51 |
1.46 |
-15.63 |
0.03 |
21.32 |
Riboswitch |
3FU2 |
10!C:32!C |
A:U |
WC [cWW][XX] |
10.32 |
56.59; 53.22 |
3.38 |
-18.03 |
0.29 |
17.36 |
Riboswitch |
3FU2 |
11!C:31!C |
G:C |
WC [cWW][XIX] |
10.67 |
50.91; 54.86 |
3.96 |
-21.53 |
0.71 |
31.06 |
Riboswitch |
3FU2 |
11!C:16!C |
G:A |
fS [tSW][X] |
9.46 |
113.8; 5.62 |
108.18 |
76.69 |
1.07 |
31.75 |
Riboswitch |
3FU2 |
18!C:29!C |
C:A |
pfS [cSW][-] |
9.37 |
130.86; 43.44 |
87.41 |
6.28 |
1.05 |
21.37 |
Riboswitch |
3FU2 |
19!C:27!C |
C:A |
pfS [cSW][-] |
9.48 |
122.85; 35.45 |
87.39 |
-15.5 |
0.23 |
15.49 |
Riboswitch |
3FU2 |
20!C:26!C |
U:A |
pfS [cSW][-] |
8.31 |
130.34; 44.04 |
86.3 |
9.49 |
1.59 |
50.18 |
Riboswitch |
3FU2 |
21!C:25!C |
C:A |
pfS [cSW][-] |
8.66 |
129.38; 45.84 |
83.55 |
23.19 |
1.87 |
41.97 |
Riboswitch |
3FU2 |
22!C:23!C |
U:A |
pS [cSH][-] |
6.19 |
142.69; 38.07 |
104.63 |
58.7 |
2.52 |
65.47 |