| RNA | PDB | Position | bp | bpC; LG [LW][Sanger] | dCC | <X ; <Y | |<X - <Y| | Torsion | Z-Diff | Buckle |
| Riboswitch | 3GAO | 15!A:81!A | G:C | WC [cWW][XIX] | 10.79 | 50.66; 52.91 | 2.25 | -13.44 | 0.06 | 18.54 |
| Riboswitch | 3GAO | 16!A:80!A | G:C | WC [cWW][XIX] | 10.69 | 54.41; 53.08 | 1.32 | -9.88 | 0.18 | 12.79 |
| Riboswitch | 3GAO | 17!A:79!A | A:U | WC [cWW][XX] | 10.5 | 54.45; 56.52 | 2.07 | -9.72 | 0.1 | 14.49 |
| Riboswitch | 3GAO | 18!A:78!A | C:G | WC [cWW][XIX] | 10.72 | 53.49; 54.88 | 1.39 | -8.57 | 0.03 | 14.88 |
| Riboswitch | 3GAO | 19!A:77!A | A:U | WC [cWW][XX] | 10.22 | 58.5; 59.22 | 0.72 | -7.1 | 0.27 | 13.13 |
| Riboswitch | 3GAO | 20!A:76!A | U:A | WC [cWW][XX] | 10.31 | 58.64; 56.29 | 2.35 | -9.83 | 0.15 | 18.36 |
| Riboswitch | 3GAO | 21!A:75!A | A:U | WC [cWW][XX] | 10.5 | 58.85; 55.82 | 3.03 | -3.49 | 0.07 | 11.32 |
| Riboswitch | 3GAO | 22!A:52!A | U:A | WC [cWW][XX] | 10.42 | 58.03; 54.33 | 3.7 | 3.79 | 0.46 | 14.27 |
| Riboswitch | 3GAO | 23!A:46!A | A:G | fS [tSW][X] | 9.42 | 2.56; 117.94 | 115.38 | 117.92 | 0.51 | 4.67 |
| Riboswitch | 3GAO | 24!A:53!A | A:C | rpS(ss:O2*-O2*)_1 [cSS][-] | 5.4 | 148.06; 139.97 | 8.09 | -125.61 | 1.78 | 35.51 |
| Riboswitch | 3GAO | 25!A:45!A | U:A | WC [cWW][XX] | 10.41 | 55.28; 57.52 | 2.25 | -11.6 | 0.18 | 11.52 |
| Riboswitch | 3GAO | 26!A:44!A | C:A | rWC_Mo [---][-] | 10.38 | 85.55; 46.4 | 39.15 | -4.83 | 0.0 | 13.42 |
| Riboswitch | 3GAO | 27!A:43!A | G:C | WC [cWW][XIX] | 10.93 | 49.97; 51.93 | 1.97 | 1.09 | 0.14 | 5.57 |
| Riboswitch | 3GAO | 28!A:42!A | C:G | WC [cWW][XIX] | 10.73 | 53.23; 54.83 | 1.6 | -4.75 | 0.35 | 12.46 |
| Riboswitch | 3GAO | 29!A:41!A | G:C | WC [cWW][XIX] | 10.61 | 54.71; 56.83 | 2.12 | -7.63 | 0.05 | 11.06 |
| Riboswitch | 3GAO | 30!A:40!A | U:A | WC [cWW][XX] | 10.45 | 57.13; 56.45 | 0.68 | -1.36 | 0.34 | 7.87 |
| Riboswitch | 3GAO | 31!A:39!A | G:C | WC [cWW][XIX] | 10.52 | 56.13; 57.5 | 1.37 | -2.3 | 0.19 | 8.96 |
| Riboswitch | 3GAO | 33!A:66!A | A:A | rH [tWH][V] | 12.28 | 21.58; 19.93 | 1.65 | 138.69 | 0.25 | 12.0 |
| Riboswitch | 3GAO | 33!A:37!A | A:G | rpS(sb:O2*-N3) [---][-] | 5.29 | 101.83; 157.25 | 55.42 | -13.86 | 1.82 | 13.95 |
| Riboswitch | 3GAO | 34!A:65!A | U:A | rH_1 [tWH][XXIV] | 9.44 | 33.06; 19.64 | 13.41 | 173.35 | 0.2 | 5.79 |
| Riboswitch | 3GAO | 34!A:37!A | U:G | rpS [cSS][-] | 4.41 | 123.39; 103.19 | 20.2 | 122.8 | 1.41 | 26.98 |
| Riboswitch | 3GAO | 35!A:64!A | A:A | rH [tWH][V] | 12.12 | 19.12; 21.55 | 2.43 | 170.06 | 0.2 | 4.0 |
| Riboswitch | 3GAO | 37!A:61!A | G:C | WC [cWW][XIX] | 10.79 | 50.78; 52.83 | 2.05 | -13.7 | 0.5 | 10.01 |
| Riboswitch | 3GAO | 38!A:66!A | G:A | fS [tSW][X] | 9.36 | 118.48; 24.87 | 93.6 | -88.13 | 0.17 | 35.21 |
| Riboswitch | 3GAO | 38!A:60!A | G:C | WC [cWW][XIX] | 10.68 | 54.79; 54.67 | 0.12 | -7.5 | 0.83 | 24.78 |
| Riboswitch | 3GAO | 46!A:53!A | G:C | WC [cWW][XIX] | 10.61 | 53.99; 55.18 | 1.19 | -1.54 | 0.83 | 26.45 |
| Riboswitch | 3GAO | 49!A:76!A | U:A | pfS* [cWS][-] | 6.06 | 71.35; 123.74 | 52.39 | 28.47 | 1.38 | 29.2 |
| Riboswitch | 3GAO | 50!A:75!A | C:U | pfS [cSW][-] | 7.85 | 37.03; 132.23 | 95.2 | -27.76 | 0.81 | 22.01 |
| Riboswitch | 3GAO | 54!A:72!A | C:G | WC [cWW][XIX] | 10.53 | 57.41; 56.02 | 1.39 | -8.37 | 0.19 | 13.87 |
| Riboswitch | 3GAO | 55!A:71!A | G:C | WC [cWW][XIX] | 10.79 | 53.03; 53.14 | 0.11 | -11.71 | 0.24 | 13.05 |
| Riboswitch | 3GAO | 56!A:70!A | G:C | WC [cWW][XIX] | 10.7 | 52.42; 54.86 | 2.44 | -10.79 | 0.13 | 11.54 |
| Riboswitch | 3GAO | 57!A:69!A | G:U | Wb [cWW][XXVIII] | 10.37 | 40.75; 67.25 | 26.5 | -12.83 | 0.21 | 15.68 |
| Riboswitch | 3GAO | 58!A:68!A | C:G | WC [cWW][XIX] | 10.54 | 56.08; 55.91 | 0.18 | -11.64 | 0.16 | 17.66 |
| Riboswitch | 3GAO | 59!A:67!A | A:U | WC [cWW][XX] | 10.62 | 55.25; 53.73 | 1.52 | -9.51 | 0.29 | 10.8 |
| Riboswitch | 3GAO | 61!A:65!A | C:A | pfS [cSW][-] | 9.03 | 129.13; 42.76 | 86.37 | 19.38 | 0.4 | 16.26 |
| Riboswitch | 3GAO | 62!A:63!A | G:U | pS* [cHS][-] | 6.5 | 148.56; 51.03 | 97.53 | 22.74 | 0.07 | 9.47 |