Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3GCA BPC Identified: 21 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3GCA 1!A:20!A C:G WC [cWW][XIX] 10.54 54.97; 54.14 0.82 -0.71 0.07 2.05
Riboswitch 3GCA 2!A:23!A U:A rS(sb:O2*-N1) [---][-] 8.11 89.29; 54.21 35.08 149.77 1.16 45.21
Riboswitch 3GCA 2!A:19!A U:A WC [cWW][XX] 10.29 56.95; 53.57 3.38 -10.63 0.01 10.64
Riboswitch 3GCA 3!A:18!A G:C WC [cWW][XIX] 10.35 54.7; 52.19 2.5 -12.89 0.33 11.17
Riboswitch 3GCA 4!A:17!A G:C WC [cWW][XIX] 10.57 53.09; 52.67 0.42 -12.12 0.22 11.86
Riboswitch 3GCA 5!A:27!A G:A fS [tSW][X] 9.37 119.42; 11.8 107.63 98.27 0.1 17.94
Riboswitch 3GCA 5!A:16!A G:C WC [cWW][XIX] 10.72 55.93; 50.84 5.09 -14.72 0.31 15.71
Riboswitch 3GCA 6!A:28!A U:A H_1 [cWH][XXIII] 8.61 64.84; 34.48 30.35 2.39 0.79 31.18
Riboswitch 3GCA 7!A:30!A C:C H_2 [---][-] 10.35 81.9; 20.09 61.82 48.32 0.43 23.58
Riboswitch 3GCA 7!A:11!A C:G rH_1 [tWH][-] 11.19 25.16; 2.02 23.15 140.58 0.16 7.11
Riboswitch 3GCA 8!A:31!A G:A fS [tSW][X] 10.02 104.24; 7.97 96.27 157.36 0.73 21.46
Riboswitch 3GCA 8!A:10!A G:A S(sb:O2*-N7) [---][-] 7.12 74.23; 36.03 38.2 -161.99 2.21 29.2
Riboswitch 3GCA 9!A:33!A C:G WC [cWW][XIX] 10.76 47.21; 51.37 4.16 -8.28 0.19 4.21
Riboswitch 3GCA 10!A:32!A A:A S [tSH][-] 10.36 86.4; 7.6 78.8 -44.62 1.36 30.64
Riboswitch 3GCA 11!A:30!A G:C WC [cWW][XIX] 10.26 55.99; 53.47 2.52 -16.96 0.06 19.49
Riboswitch 3GCA 11!A:14!A G:A fS [tSW][X] 9.05 121.95; 5.11 116.84 123.62 0.36 20.31
Riboswitch 3GCA 13!A:31!A A:A pfS [cSW][-] 9.25 32.24; 126.31 94.07 10.2 0.68 23.16
Riboswitch 3GCA 17!A:26!A C:A pfS [cSW][-] 9.2 129.11; 31.38 97.72 -17.38 0.13 11.56
Riboswitch 3GCA 18!A:24!A C:A S(sb:O2*-N7) [---][-] 8.2 128.9; 27.49 101.41 122.43 1.66 11.26
Riboswitch 3GCA 19!A:23!A A:A rpS(sb:O2*-N3) [cSS][-] 5.59 105.25; 143.76 38.51 -31.06 0.3 34.91
Riboswitch 3GCA 20!A:21!A G:U pS* [cHS][-] 6.6 133.5; 54.74 78.76 54.66 1.0 39.5