Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3GES BPC Identified: 35 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3GES 15!A:81!A G:C WC [cWW][XIX] 10.85 51.67; 51.58 0.08 -9.65 0.45 9.41
Riboswitch 3GES 16!A:80!A G:C WC [cWW][XIX] 10.6 54.71; 55.33 0.61 -10.72 0.11 14.98
Riboswitch 3GES 17!A:79!A A:U WC [cWW][XX] 10.42 55.62; 56.41 0.79 -10.05 0.06 19.25
Riboswitch 3GES 18!A:78!A C:G WC [cWW][XIX] 10.68 54.17; 54.75 0.58 -6.13 0.01 8.23
Riboswitch 3GES 19!A:77!A A:U WC [cWW][XX] 10.22 59.56; 58.45 1.11 -4.75 0.01 11.41
Riboswitch 3GES 20!A:76!A U:A WC [cWW][XX] 10.09 60.03; 57.69 2.34 -14.23 0.34 21.23
Riboswitch 3GES 21!A:75!A A:U WC [cWW][XX] 10.49 58.3; 56.56 1.74 -5.61 0.3 11.04
Riboswitch 3GES 22!A:52!A U:A WC [cWW][XX] 10.4 58.01; 56.16 1.85 3.39 0.06 9.22
Riboswitch 3GES 23!A:46!A A:G fS [tSW][X] 9.4 3.42; 119.33 115.91 141.06 0.25 7.96
Riboswitch 3GES 24!A:53!A A:C rpS(ss:O2*-O2*)_1 [cSS][-] 5.21 147.41; 138.19 9.23 -123.49 1.5 36.28
Riboswitch 3GES 25!A:45!A U:A WC [cWW][XX] 10.3 56.46; 58.38 1.92 -11.37 0.16 12.18
Riboswitch 3GES 27!A:43!A G:C WC [cWW][XIX] 10.92 51.17; 54.2 3.03 0.04 0.2 4.95
Riboswitch 3GES 28!A:42!A C:G WC [cWW][XIX] 10.73 53.58; 54.42 0.84 1.94 0.12 15.88
Riboswitch 3GES 29!A:41!A G:C WC [cWW][XIX] 10.62 53.56; 56.0 2.44 -11.17 0.06 12.28
Riboswitch 3GES 30!A:40!A U:A WC [cWW][XX] 10.37 56.64; 55.93 0.71 -3.0 0.22 10.61
Riboswitch 3GES 31!A:39!A G:C WC [cWW][XIX] 10.46 55.03; 56.08 1.06 -4.36 0.18 7.05
Riboswitch 3GES 33!A:66!A A:A rH [tWH][V] 12.32 21.47; 17.44 4.03 135.54 0.15 10.85
Riboswitch 3GES 33!A:37!A A:G rpS(sb:O2*-N3) [---][-] 5.14 100.2; 158.64 58.44 -13.9 1.78 14.88
Riboswitch 3GES 34!A:65!A U:A rH_1 [tWH][XXIV] 9.52 32.51; 19.22 13.29 171.29 0.08 8.4
Riboswitch 3GES 34!A:37!A U:G rpS [cSS][-] 4.3 120.99; 99.58 21.4 126.07 1.47 27.87
Riboswitch 3GES 35!A:64!A A:A rH [tWH][V] 12.35 18.61; 21.62 3.01 172.31 0.15 5.57
Riboswitch 3GES 37!A:61!A G:C WC [cWW][XIX] 10.8 50.2; 53.64 3.44 -14.51 0.49 11.96
Riboswitch 3GES 38!A:66!A G:A fS [tSW][X] 9.4 117.08; 24.16 92.92 -95.05 0.17 33.11
Riboswitch 3GES 38!A:60!A G:C WC [cWW][XIX] 10.54 54.18; 57.05 2.87 -11.14 0.75 28.68
Riboswitch 3GES 46!A:53!A G:C WC [cWW][XIX] 10.63 54.31; 57.16 2.86 1.5 0.61 22.35
Riboswitch 3GES 49!A:76!A U:A pfS* [cWS][-] 6.03 67.43; 127.46 60.03 29.81 1.25 30.58
Riboswitch 3GES 50!A:75!A C:U pfS [cSW][-] 7.5 38.55; 130.17 91.62 -26.79 0.26 20.83
Riboswitch 3GES 54!A:72!A C:G WC [cWW][XIX] 10.46 56.19; 53.99 2.21 -10.3 0.26 18.04
Riboswitch 3GES 55!A:71!A G:C WC [cWW][XIX] 10.77 53.14; 53.67 0.53 -14.19 0.32 15.86
Riboswitch 3GES 56!A:70!A G:C WC [cWW][XIX] 10.67 53.4; 54.43 1.03 -15.01 0.31 15.78
Riboswitch 3GES 57!A:69!A G:U Wb [cWW][XXVIII] 10.31 40.19; 65.8 25.6 -17.02 0.01 17.46
Riboswitch 3GES 58!A:68!A C:G WC [cWW][XIX] 10.59 54.47; 54.22 0.24 -14.79 0.13 15.85
Riboswitch 3GES 59!A:67!A A:U WC [cWW][XX] 10.5 55.58; 54.18 1.4 -16.11 0.21 13.48
Riboswitch 3GES 61!A:65!A C:A pfS [cSW][-] 9.11 129.08; 42.07 87.01 17.62 0.64 14.12
Riboswitch 3GES 62!A:63!A G:U pS* [cHS][-] 6.68 145.55; 49.06 96.49 7.28 0.45 7.06