| RNA | PDB | Position | bp | bpC; LG [LW][Sanger] | dCC | <X ; <Y | |<X - <Y| | Torsion | Z-Diff | Buckle |
| Riboswitch | 3GX5 | 1!A:93!A | G:C | WC [cWW][XIX] | 10.97 | 51.52; 52.07 | 0.55 | -8.04 | 0.11 | 11.82 |
| Riboswitch | 3GX5 | 2!A:92!A | G:C | WC [cWW][XIX] | 10.67 | 53.62; 56.6 | 2.98 | -13.07 | 0.18 | 22.1 |
| Riboswitch | 3GX5 | 3!A:91!A | C:G | WC [cWW][XIX] | 10.64 | 54.29; 56.24 | 1.94 | -8.27 | 0.38 | 16.44 |
| Riboswitch | 3GX5 | 4!A:90!A | U:A | WC [cWW][XX] | 10.42 | 53.64; 57.88 | 4.25 | -11.16 | 0.28 | 19.38 |
| Riboswitch | 3GX5 | 5!A:89!A | U:G | Wb [cWW][XXVIII] | 10.3 | 68.98; 42.02 | 26.97 | -10.43 | 0.03 | 11.0 |
| Riboswitch | 3GX5 | 6!A:88!A | A:U | WC [cWW][XX] | 10.34 | 55.02; 56.31 | 1.29 | -7.76 | 0.04 | 13.84 |
| Riboswitch | 3GX5 | 7!A:87!A | U:A | WC [cWW][XX] | 10.27 | 58.18; 59.22 | 1.04 | -9.77 | 0.14 | 14.28 |
| Riboswitch | 3GX5 | 8!A:86!A | C:G | WC [cWW][XIX] | 10.68 | 52.14; 54.46 | 2.31 | -8.74 | 0.02 | 10.43 |
| Riboswitch | 3GX5 | 11!A:44!A | G:C | rpS [cSS][-] | 5.3 | 99.63; 160.19 | 60.56 | -56.88 | 0.64 | 31.6 |
| Riboswitch | 3GX5 | 12!A:43!A | A:G | rpS [cSS][-] | 5.41 | 149.08; 109.23 | 39.84 | -20.7 | 0.66 | 31.83 |
| Riboswitch | 3GX5 | 13!A:41!A | G:C | WC [cWW][XIX] | 10.8 | 57.44; 57.51 | 0.08 | -1.8 | 0.39 | 15.53 |
| Riboswitch | 3GX5 | 15!A:40!A | G:C | WC [cWW][XIX] | 10.45 | 58.91; 57.54 | 1.38 | 0.61 | 0.03 | 3.76 |
| Riboswitch | 3GX5 | 16!A:39!A | G:C | WC [cWW][XIX] | 10.81 | 58.68; 51.4 | 7.28 | 0.2 | 0.03 | 19.45 |
| Riboswitch | 3GX5 | 17!A:38!A | U:A | WC [cWW][XX] | 10.59 | 56.02; 52.74 | 3.28 | -3.48 | 0.19 | 11.98 |
| Riboswitch | 3GX5 | 18!A:37!A | G:A | S [tSH][XI] | 9.46 | 98.11; 9.8 | 88.3 | 25.4 | 0.34 | 8.09 |
| Riboswitch | 3GX5 | 19!A:36!A | G:A | S [tSH][XI] | 9.09 | 94.52; 10.43 | 84.09 | -77.27 | 0.22 | 27.74 |
| Riboswitch | 3GX5 | 20!A:35!A | A:G | S [tSH][XI] | 8.9 | 12.58; 105.63 | 93.05 | 14.06 | 0.87 | 31.01 |
| Riboswitch | 3GX5 | 20!A:32!A | A:G | rS [tSS][-] | 8.07 | 59.62; 93.04 | 33.42 | 137.92 | 1.25 | 45.59 |
| Riboswitch | 3GX5 | 21!A:36!A | G:A | rS(bs:N2-O2*) [---][-] | 4.55 | 102.17; 89.59 | 12.58 | -142.99 | 1.93 | 68.62 |
| Riboswitch | 3GX5 | 21!A:31!A | G:C | WC [cWW][XIX] | 10.48 | 55.96; 57.0 | 1.04 | 2.04 | 0.29 | 12.81 |
| Riboswitch | 3GX5 | 22!A:30!A | G:C | WC [cWW][XIX] | 10.76 | 57.37; 52.84 | 4.53 | -2.29 | 0.34 | 9.56 |
| Riboswitch | 3GX5 | 23!A:62!A | G:A | fS [tSW][X] | 9.7 | 118.04; 11.04 | 107.0 | 135.53 | 0.29 | 16.45 |
| Riboswitch | 3GX5 | 23!A:29!A | G:C | WC [cWW][XIX] | 10.68 | 58.4; 55.12 | 3.28 | -3.91 | 0.09 | 7.61 |
| Riboswitch | 3GX5 | 24!A:85!A | A:A | pfS [cSW][-] | 10.16 | 31.59; 108.66 | 77.07 | -57.12 | 2.0 | 45.51 |
| Riboswitch | 3GX5 | 25!A:68!A | C:G | WC [cWW][XIX] | 10.15 | 56.25; 60.94 | 4.69 | -19.74 | 0.59 | 45.15 |
| Riboswitch | 3GX5 | 25!A:67!A | C:U | WC_mo [cWW][XVIII] | 11.53 | 33.76; 45.87 | 12.11 | -1.58 | 1.96 | 63.79 |
| Riboswitch | 3GX5 | 26!A:67!A | U:U | Wb [cWW][XVI] | 8.61 | 45.46; 77.69 | 32.23 | -25.46 | 0.11 | 38.35 |
| Riboswitch | 3GX5 | 27!A:66!A | G:C | WC [cWW][XIX] | 10.18 | 57.24; 59.3 | 2.06 | -18.14 | 0.64 | 27.65 |
| Riboswitch | 3GX5 | 28!A:65!A | G:C | WC [cWW][XIX] | 10.7 | 56.58; 53.79 | 2.79 | -13.08 | 0.38 | 20.94 |
| Riboswitch | 3GX5 | 30!A:61!A | C:A | pfS [cSW][-] | 9.61 | 120.95; 33.74 | 87.2 | -19.15 | 0.86 | 16.37 |
| Riboswitch | 3GX5 | 42!A:60!A | G:C | WC [cWW][XIX] | 10.73 | 53.53; 55.12 | 1.58 | -6.29 | 0.01 | 7.87 |
| Riboswitch | 3GX5 | 43!A:59!A | G:C | WC [cWW][XIX] | 10.52 | 57.14; 57.75 | 0.61 | -10.71 | 0.63 | 26.28 |
| Riboswitch | 3GX5 | 44!A:58!A | C:G | WC [cWW][XIX] | 10.92 | 53.82; 51.28 | 2.54 | -14.52 | 0.59 | 24.9 |
| Riboswitch | 3GX5 | 46!A:47!A | A:C | pS* [cHS][-] | 6.96 | 141.41; 37.87 | 103.54 | 7.85 | 0.62 | 12.34 |
| Riboswitch | 3GX5 | 47!A:57!A | C:U | WC [cWW][XVIII] | 8.28 | 58.64; 62.3 | 3.67 | -23.83 | 2.56 | 9.07 |
| Riboswitch | 3GX5 | 47!A:56!A | C:G | WC [cWW][XIX] | 10.67 | 56.2; 49.66 | 6.54 | 0.26 | 0.35 | 16.49 |
| Riboswitch | 3GX5 | 48!A:55!A | C:G | WC [cWW][XIX] | 10.43 | 57.48; 55.2 | 2.28 | -6.46 | 0.03 | 14.37 |
| Riboswitch | 3GX5 | 49!A:54!A | A:U | WC [cWW][XX] | 10.6 | 55.42; 56.17 | 0.76 | 5.67 | 0.46 | 11.54 |
| Riboswitch | 3GX5 | 50!A:53!A | G:A | S [tSH][XI] | 9.72 | 94.89; 8.46 | 86.43 | -84.26 | 0.05 | 20.03 |
| Riboswitch | 3GX5 | 58!A:88!A | G:U | rS(ss:O2*-O2*)_2 [---][-] | 5.89 | 175.14; 164.66 | 10.49 | -159.55 | 0.51 | 53.02 |
| Riboswitch | 3GX5 | 63!A:66!A | U:C | pS*(sp:O2*-O1P) [---][-] | 9.49 | 47.79; 98.57 | 50.77 | -163.76 | 0.7 | 80.79 |
| Riboswitch | 3GX5 | 64!A:85!A | U:A | WC [cWW][XX] | 10.6 | 48.86; 54.66 | 5.8 | -6.83 | 0.05 | 7.38 |
| Riboswitch | 3GX5 | 69!A:82!A | C:G | WC [cWW][XIX] | 10.75 | 56.42; 53.58 | 2.84 | -4.63 | 0.03 | 9.22 |
| Riboswitch | 3GX5 | 70!A:81!A | A:U | WC [cWW][XX] | 10.48 | 54.84; 55.62 | 0.78 | -6.09 | 0.43 | 4.72 |
| Riboswitch | 3GX5 | 71!A:80!A | G:U | Wb [cWW][XXVIII] | 10.23 | 45.04; 69.18 | 24.14 | -9.34 | 0.36 | 12.68 |
| Riboswitch | 3GX5 | 72!A:79!A | C:G | WC [cWW][XIX] | 10.5 | 57.55; 56.2 | 1.36 | -7.83 | 0.03 | 15.81 |
| Riboswitch | 3GX5 | 73!A:78!A | G:C | WC [cWW][XIX] | 10.51 | 55.38; 59.54 | 4.16 | 3.26 | 0.2 | 0.73 |
| Riboswitch | 3GX5 | 74!A:77!A | G:A | S [tSH][XI] | 9.35 | 97.1; 11.4 | 85.7 | -95.1 | 1.03 | 9.93 |
| Riboswitch | 3GX5 | 74!A:76!A | G:A | S(sb:O2*-N7) [---][-] | 7.62 | 88.85; 34.54 | 54.32 | -173.19 | 2.17 | 24.6 |