Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3GX6 BPC Identified: 46 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3GX6 1!A:93!A G:C WC [cWW][XIX] 11.17 59.92; 48.17 11.76 -10.28 0.85 7.99
Riboswitch 3GX6 2!A:92!A G:C WC [cWW][XIX] 10.64 54.26; 59.54 5.28 -6.88 0.03 10.76
Riboswitch 3GX6 3!A:91!A C:G WC [cWW][XIX] 10.82 50.27; 58.94 8.67 -5.1 0.52 17.32
Riboswitch 3GX6 4!A:90!A U:A WC [cWW][XX] 10.68 49.3; 57.28 7.97 -8.54 0.31 18.99
Riboswitch 3GX6 5!A:89!A U:G Wb [cWW][XXVIII] 10.4 60.67; 47.51 13.16 -6.43 0.0 7.95
Riboswitch 3GX6 6!A:88!A A:U WC [cWW][XX] 10.24 54.86; 56.8 1.93 -12.63 0.15 21.3
Riboswitch 3GX6 7!A:87!A U:A WC [cWW][XX] 10.14 57.34; 60.35 3.02 -6.23 0.3 10.67
Riboswitch 3GX6 8!A:86!A C:G WC [cWW][XIX] 11.22 46.85; 54.27 7.43 -9.04 0.41 20.19
Riboswitch 3GX6 11!A:44!A G:C rpS [cSS][-] 5.29 103.1; 164.57 61.47 -44.17 0.83 26.98
Riboswitch 3GX6 12!A:59!A A:C fS(sb:O2*-N1)_1 [tSS][-] 8.24 57.88; 85.48 27.6 155.6 2.53 42.05
Riboswitch 3GX6 12!A:43!A A:G rpS [cSS][-] 5.5 155.09; 106.3 48.79 -23.17 0.63 27.81
Riboswitch 3GX6 13!A:15!A G:G pS_2 [---][-] 6.45 113.82; 74.82 39.0 -23.23 1.64 18.47
Riboswitch 3GX6 15!A:40!A G:C Wb [---][-] 11.38 32.75; 50.24 17.49 9.11 0.18 10.61
Riboswitch 3GX6 16!A:39!A G:C WC [cWW][XIX] 10.98 56.54; 47.19 9.34 10.13 0.07 32.82
Riboswitch 3GX6 17!A:38!A U:A Wb [---][-] 10.82 65.67; 50.1 15.57 -1.4 0.03 16.62
Riboswitch 3GX6 18!A:37!A G:A S [tSH][XI] 9.47 100.64; 3.89 96.74 -14.25 0.39 13.25
Riboswitch 3GX6 19!A:36!A G:A S [tSH][XI] 9.23 107.46; 13.37 94.1 -52.28 0.14 28.43
Riboswitch 3GX6 20!A:35!A A:G S [tSH][XI] 9.52 18.28; 108.1 89.82 10.75 0.53 23.23
Riboswitch 3GX6 21!A:31!A G:C WC [cWW][XIX] 10.59 59.44; 51.1 8.34 -1.98 0.15 12.45
Riboswitch 3GX6 22!A:30!A G:C WC [cWW][XIX] 10.72 55.42; 50.5 4.92 2.96 0.46 4.14
Riboswitch 3GX6 23!A:62!A G:A fS [tSW][X] 9.71 121.72; 10.82 110.89 135.42 0.39 8.52
Riboswitch 3GX6 23!A:29!A G:C WC [cWW][XIX] 10.88 63.97; 54.5 9.47 0.14 0.22 8.55
Riboswitch 3GX6 24!A:85!A A:A pfS [cSW][-] 9.7 29.55; 111.35 81.8 -54.59 2.42 46.46
Riboswitch 3GX6 25!A:68!A C:G WC [cWW][XIX] 10.55 49.89; 57.82 7.93 -13.12 0.7 43.06
Riboswitch 3GX6 26!A:67!A U:U Wb [cWW][XVI] 9.03 42.07; 74.66 32.59 -24.22 0.04 40.42
Riboswitch 3GX6 27!A:66!A G:C WC [cWW][XIX] 10.32 58.72; 60.04 1.32 -12.31 0.53 21.02
Riboswitch 3GX6 28!A:65!A G:C WC [cWW][XIX] 10.99 52.56; 53.31 0.75 -7.57 0.72 19.39
Riboswitch 3GX6 30!A:61!A C:A pfS [cSW][-] 9.66 120.75; 31.68 89.07 -14.77 0.33 11.01
Riboswitch 3GX6 42!A:60!A G:C WC [cWW][XIX] 10.84 55.83; 53.43 2.4 2.43 0.5 12.82
Riboswitch 3GX6 43!A:59!A G:C WC [cWW][XIX] 10.73 57.55; 55.85 1.71 -5.96 0.12 17.12
Riboswitch 3GX6 44!A:58!A C:G WC [cWW][XIX] 10.92 52.91; 47.25 5.65 -11.18 0.45 20.18
Riboswitch 3GX6 46!A:47!A A:C pS* [cHS][-] 6.94 143.74; 41.63 102.1 19.18 0.25 9.95
Riboswitch 3GX6 47!A:56!A C:G WC [cWW][XIX] 11.15 50.8; 45.86 4.95 1.42 0.33 14.76
Riboswitch 3GX6 48!A:55!A C:G WC [cWW][XIX] 10.57 53.41; 58.47 5.06 -8.35 0.25 13.38
Riboswitch 3GX6 49!A:54!A A:U WC [cWW][XX] 10.6 53.25; 59.78 6.53 6.9 0.28 10.18
Riboswitch 3GX6 50!A:53!A G:A S [tSH][XI] 9.88 90.32; 11.94 78.39 -110.79 0.32 21.26
Riboswitch 3GX6 56!A:90!A G:A rpS*(bp:N2-O1P) [---][-] 12.03 80.77; 99.35 18.58 108.59 0.05 70.0
Riboswitch 3GX6 58!A:88!A G:U rS(ss:O2*-O2*)_2 [---][-] 6.32 165.41; 159.96 5.44 -161.47 0.17 44.38
Riboswitch 3GX6 63!A:66!A U:C pS*(sp:O2*-O1P) [---][-] 9.21 49.24; 98.61 49.37 -164.83 1.19 79.08
Riboswitch 3GX6 64!A:85!A U:A WC [cWW][XX] 10.69 55.92; 58.68 2.77 -6.75 0.13 8.65
Riboswitch 3GX6 69!A:82!A C:G WC [cWW][XIX] 11.03 53.68; 55.22 1.54 -6.84 0.01 8.9
Riboswitch 3GX6 70!A:81!A A:U WC [cWW][XX] 10.28 54.54; 58.74 4.21 -7.22 0.42 17.93
Riboswitch 3GX6 71!A:80!A G:U Wb [cWW][XXVIII] 10.35 48.64; 60.7 12.06 -13.07 0.36 22.7
Riboswitch 3GX6 72!A:79!A C:G WC [cWW][XIX] 10.9 55.21; 53.27 1.94 -5.17 0.67 15.48
Riboswitch 3GX6 73!A:78!A G:C WC [cWW][XIX] 10.69 56.87; 49.42 7.45 4.27 0.01 4.76
Riboswitch 3GX6 74!A:76!A G:A S(sb:O2*-N7) [---][-] 7.58 95.21; 33.09 62.12 -179.75 1.96 25.35