Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3HAY BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
gRNA 3HAY 1!E:57!E G:C WC [cWW][XIX] 11.11 49.55; 50.23 0.68 -15.4 0.46 23.06
gRNA 3HAY 2!E:56!E G:C WC_Mo [cWW][XIX] 11.14 53.56; 60.81 7.25 -23.91 0.19 28.93
gRNA 3HAY 3!E:55!E G:C WC [cWW][XIX] 11.18 49.35; 49.38 0.03 -22.11 0.06 31.81
gRNA 3HAY 4!E:54!E U:A WC [cWW][XX] 10.39 62.84; 57.72 5.12 -19.77 0.84 33.81
gRNA 3HAY 5!E:53!E C:G WC [cWW][XIX] 10.85 51.11; 61.94 10.83 -10.79 0.58 21.31
gRNA 3HAY 6!E:52!E C:G WC [cWW][XIX] 10.96 57.53; 57.15 0.39 -4.79 0.42 11.96
gRNA 3HAY 7!E:51!E G:C Wb [---][-] 10.2 49.64; 67.93 18.29 -14.4 0.64 20.96
gRNA 3HAY 8!E:50!E C:G WC_Mo [cWW][XIX] 10.56 72.77; 58.67 14.1 -12.82 0.31 13.78
gRNA 3HAY 9!E:49!E C:G Wb [---][-] 10.74 65.44; 47.22 18.23 -7.91 0.17 14.87
gRNA 3HAY 11!E:13!F U:A WC [cWW][XX] 10.82 53.36; 59.64 6.28 -17.67 0.5 35.68
gRNA 3HAY 12!E:12!F G:C Wb [---][-] 10.75 44.22; 58.69 14.47 -16.98 0.53 23.89
gRNA 3HAY 14!E:10!F G:C WC [cWW][XIX] 11.22 60.32; 52.63 7.69 -8.34 0.7 25.84
gRNA 3HAY 15!E:9!F U:A WC [cWW][XX] 10.86 54.32; 60.03 5.71 2.47 0.34 10.06
gRNA 3HAY 16!E:42!E G:U Wb [cWW][XXVIII] 11.21 43.17; 60.86 17.69 -4.5 0.43 6.68
gRNA 3HAY 17!E:41!E C:G WC [cWW][XIX] 10.8 57.12; 50.18 6.94 -17.11 0.38 22.83
gRNA 3HAY 18!E:40!E C:G WC [cWW][XIX] 10.81 53.9; 58.77 4.87 -13.56 0.17 15.63
gRNA 3HAY 19!E:39!E C:G WC_Mo [cWW][XIX] 11.09 60.35; 57.12 3.23 -13.12 0.79 28.49
gRNA 3HAY 20!E:38!E G:C WC [cWW][XIX] 10.95 43.73; 50.95 7.21 3.28 0.41 3.6
gRNA 3HAY 21!E:37!E G:C WC [cWW][XIX] 10.86 54.18; 53.02 1.17 -0.8 0.16 7.73
gRNA 3HAY 22!E:36!E G:C WC [cWW][XIX] 10.52 57.05; 56.37 0.68 5.87 0.87 10.4
gRNA 3HAY 23!E:35!E U:U Wb [cWW][XVI] 9.43 67.04; 37.28 29.77 4.1 0.73 17.28
gRNA 3HAY 24!E:34!E G:A S [tSH][XI] 9.12 106.86; 24.16 82.7 -17.89 0.67 32.98
gRNA 3HAY 25!E:33!E A:G S_Mo [tSH][XI] 10.01 17.14; 107.82 90.69 -3.87 0.47 30.9
gRNA 3HAY 43!E:6!F A:U WC [cWW][XX] 10.48 61.02; 57.47 3.55 10.12 0.69 18.49
gRNA 3HAY 44!E:5!F A:U WC [cWW][XX] 10.32 65.64; 60.84 4.8 -15.41 0.45 24.57
gRNA 3HAY 45!E:4!F U:A WC [cWW][XX] 10.91 59.3; 54.23 5.07 -15.07 0.2 24.04
gRNA 3HAY 46!E:3!F U:A WC [cWW][XX] 11.01 53.24; 52.18 1.07 -13.43 0.62 24.6
gRNA 3HAY 47!E:2!F A:U WC [cWW][XX] 10.6 52.91; 59.06 6.16 -5.5 0.43 19.83
gRNA 3HAY 48!E:1!F U:A WC [cWW][XX] 10.5 55.2; 58.42 3.23 -7.66 0.29 29.88
gRNA 3HAY 56!E:58!E C:A S(sb:O2*-N7) [---][-] 8.06 134.33; 33.16 101.17 -77.24 2.41 55.64