Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3HJY BPC Identified: 21 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
gRNA 3HJY 1!C:20!D G:C Wb [---][-] 10.69 41.73; 63.3 21.57 -2.92 0.45 10.72
gRNA 3HJY 2!C:19!D G:C WC [cWW][XIX] 10.96 49.91; 46.67 3.24 -6.9 0.34 4.8
gRNA 3HJY 3!C:18!D G:C WC [cWW][XIX] 10.78 54.36; 46.58 7.78 -11.14 0.28 9.8
gRNA 3HJY 4!C:17!D C:G WC [cWW][XIX] 10.72 52.14; 48.07 4.07 -8.16 0.47 18.21
gRNA 3HJY 5!C:16!D U:A WC [cWW][XX] 10.76 56.11; 53.29 2.82 -0.26 0.23 5.74
gRNA 3HJY 6!C:15!D C:G WC [cWW][XIX] 10.68 59.13; 57.3 1.83 -6.31 0.22 15.14
gRNA 3HJY 7!C:14!D C:G WC [cWW][XIX] 10.72 51.08; 56.16 5.08 -15.02 0.22 24.5
gRNA 3HJY 8!C:13!D G:C WC [cWW][XIX] 10.55 56.74; 52.99 3.75 -17.85 0.41 19.34
gRNA 3HJY 14!C:13!E C:G Wb [---][-] 10.86 63.65; 48.31 15.33 -13.69 0.53 19.68
gRNA 3HJY 15!C:12!E G:C WC [cWW][XIX] 10.74 52.64; 61.04 8.4 4.1 1.57 12.79
gRNA 3HJY 16!C:11!E C:G WC_mo [cWW][XIX] 11.76 45.57; 46.06 0.49 20.48 0.49 38.63
gRNA 3HJY 17!C:5!D G:U Wb [cWW][XXVIII] 10.88 42.75; 66.79 24.04 -2.59 0.39 28.29
gRNA 3HJY 18!C:4!D G:C WC [cWW][XIX] 10.73 59.66; 56.6 3.05 -19.98 0.06 24.88
gRNA 3HJY 19!C:3!D* C:G WC [cWW][XIX]; Wb* [---][-] 10.97 46.04; 60.28 14.23 -20.41 0.25 19.23
gRNA 3HJY 20!C:2!D G:C WC [cWW][XIX] 11.13 46.87; 52.49 5.62 -17.18 0.48 29.55
gRNA 3HJY 21!C:1!D C:G WC [cWW][XIX] 10.71 50.66; 54.24 3.58 -4.43 0.03 4.68
gRNA 3HJY 8!D:8!E G:C WC [cWW][XIX] 10.89 62.48; 49.38 13.1 -0.38 0.14 10.01
gRNA 3HJY 9!D:7!E C:G WC [cWW][XIX] 10.77 54.86; 51.14 3.72 -10.53 0.08 13.38
gRNA 3HJY 10!D:6!E U:A WC [cWW][XX] 10.35 59.57; 57.19 2.38 -0.45 0.23 5.98
gRNA 3HJY 11!D:5!E C:G WC [cWW][XIX] 10.56 57.01; 54.33 2.68 -2.93 0.28 11.85
gRNA 3HJY 12!D:4!E C:G WC_Mo [cWW][XIX] 11.05 62.42; 52.54 9.88 -4.83 0.36 10.92