Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3HL2 BPC Identified: 34 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 3HL2 1!E:72!E G:C WC [cWW][XIX] 11.13 50.36; 57.25 6.89 -6.42 0.6 7.99
tRNA 3HL2 3!E:70!E C:G WC [cWW][XIX] 10.52 53.45; 57.59 4.15 -6.87 1.26 26.44
tRNA 3HL2 4!E:69!E C:G WC [cWW][XIX] 10.52 55.37; 57.15 1.79 -0.27 0.19 7.56
tRNA 3HL2 5A!E:68!E G:C WC [cWW][XIX] 11.4 53.8; 53.26 0.54 -5.87 0.95 16.16
tRNA 3HL2 5C!E:67A!E A:U WC [cWW][XX] 10.72 50.34; 53.86 3.53 -13.21 0.1 21.13
tRNA 3HL2 6!E:66!E U:U Wb [cWW][XVI] 8.98 69.35; 39.58 29.77 -29.94 1.28 39.28
tRNA 3HL2 6!E:65!E U:C WC_mo [cWW][XVIII] 12.11 40.67; 37.6 3.08 -9.71 0.94 43.16
tRNA 3HL2 7!E:65!E G:C WC [cWW][XIX] 10.15 55.19; 63.62 8.43 -18.09 0.1 21.16
tRNA 3HL2 10!E:25!E C:G WC_Mo [cWW][XIX] 10.4 66.4; 56.5 9.9 18.45 0.4 16.37
tRNA 3HL2 11!E:24!E C:G WC [cWW][XIX] 10.6 51.74; 58.65 6.91 6.09 0.92 14.44
tRNA 3HL2 12!E:23!E U:G Wb [cWW][XXVIII] 10.3 68.6; 42.56 26.04 18.76 0.34 14.7
tRNA 3HL2 13!E:22!E C:G Wb [---][-] 10.42 57.64; 40.84 16.8 0.36 0.37 18.73
tRNA 3HL2 14!E:21!E A:U WC [cWW][XX] 10.24 62.96; 50.8 12.16 5.19 0.56 10.03
tRNA 3HL2 15!E:20A!E G:C WC [cWW][XIX] 10.89 55.81; 59.28 3.48 17.73 0.59 20.97
tRNA 3HL2 16!E:59!E U:U rWb [tWW][XIII] 9.0 39.87; 46.75 6.88 -131.02 0.3 31.25
tRNA 3HL2 18!E:55!E G:U fS_2 [---][-] 9.42 28.08; 113.84 85.76 -150.79 0.74 22.71
tRNA 3HL2 19!E:56!E G:C WC [cWW][XIX] 10.77 52.51; 51.25 1.25 -3.1 0.45 12.04
tRNA 3HL2 26!E:44!E U:A WC [cWW][XX] 9.95 64.31; 47.48 16.83 0.68 1.73 25.24
tRNA 3HL2 28!E:42!E C:G WC [cWW][XIX] 10.88 56.01; 61.77 5.75 7.86 0.61 8.93
tRNA 3HL2 29!E:41!E A:U WC [cWW][XX] 10.33 54.48; 59.5 5.02 -7.76 0.99 7.39
tRNA 3HL2 30!E:40!E G:C WC [cWW][XIX] 10.05 56.27; 57.98 1.7 5.13 1.62 15.54
tRNA 3HL2 31!E:39!E G:C WC [cWW][XIX] 10.6 62.5; 51.0 11.5 7.42 0.27 15.09
tRNA 3HL2 45!E:49!E G:A WC [cWW][VIII] 12.79 50.95; 50.94 0.01 9.35 0.69 18.31
tRNA 3HL2 46A!E:48!E C:G WC [cWW][XIX] 10.25 55.42; 60.34 4.92 -7.29 0.03 14.61
tRNA 3HL2 46B!E:47!E* U:A WC [cWW][XX]; WC [cWW][XX] 10.96 63.16; 57.01 6.15 -5.08 0.36 12.68
tRNA 3HL2 46C!E:46L!E G:C WC_Mo [cWW][XIX] 10.71 59.93; 67.87 7.94 -5.13 0.94 22.33
tRNA 3HL2 46D!E:46K!E U:A WC [cWW][XX] 10.85 54.73; 63.24 8.51 -0.96 0.14 6.15
tRNA 3HL2 46E!E:46J!E C:G WC_Mo [cWW][XIX] 11.13 60.24; 57.85 2.39 11.07 0.65 15.4
tRNA 3HL2 50!E:64!E G:C Wb [---][-] 10.84 47.4; 60.18 12.78 -6.26 0.67 15.33
tRNA 3HL2 51!E:63!E U:A WC [cWW][XX] 10.18 58.94; 55.53 3.41 -18.52 0.23 29.37
tRNA 3HL2 52!E:62!E G:C WC [cWW][XIX] 10.74 57.91; 54.71 3.19 -5.79 0.35 12.05
tRNA 3HL2 53!E:61!E G:C WC [cWW][XIX] 10.37 51.84; 56.45 4.61 -1.28 0.55 19.61
tRNA 3HL2 54!E:58!E U:A rH_1 [tWH][XXIV] 10.1 28.63; 13.27 15.35 149.31 0.75 15.95
tRNA 3HL2 55!E:57!E U:A S(sb:O2*-N7) [---][-] 7.07 82.81; 37.55 45.26 175.41 2.35 25.84