Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3I2Q BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HP_ribozyme 3I2Q -4!A:13!B C:G WC [cWW][XIX] 10.75 54.69; 55.09 0.4 -3.31 0.18 20.64
HP_ribozyme 3I2Q -3!A:12!B C:G WC [cWW][XIX] 10.48 55.33; 55.08 0.24 -0.75 0.04 3.08
HP_ribozyme 3I2Q -2!A:11!B C:G WC [cWW][XIX] 10.47 59.96; 56.82 3.14 3.01 0.2 6.59
HP_ribozyme 3I2Q 1!A:25!B G:C WC [cWW][XIX] 10.54 51.3; 54.53 3.23 -14.76 0.39 19.48
HP_ribozyme 3I2Q 2!A:8!B U:G S*_1 [tHS][-] 10.94 12.53; 105.49 92.97 25.67 0.1 10.52
HP_ribozyme 3I2Q 3!A:7!B C:A Wb* [cWW][-] 11.03 47.2; 72.38 25.18 -3.76 0.22 30.63
HP_ribozyme 3I2Q 4!A:6!B C:G WC [cWW][XIX] 10.6 57.08; 57.99 0.91 -3.9 0.4 14.02
HP_ribozyme 3I2Q 5!A:5!B A:U WC [cWW][XX] 10.38 58.53; 56.63 1.91 -2.2 0.02 5.47
HP_ribozyme 3I2Q 6!A:4!B C:G WC [cWW][XIX] 10.43 60.78; 58.13 2.65 -2.07 0.19 8.25
HP_ribozyme 3I2Q 7!A:3!B C:G WC [cWW][XIX] 10.16 61.12; 55.46 5.66 -5.33 0.17 12.09
HP_ribozyme 3I2Q 8!A:2!B G:C WC [cWW][XIX] 10.31 59.17; 61.97 2.79 -6.7 0.14 12.65
HP_ribozyme 3I2Q 10!B:25!B A:C rpS(sb:O2*-N3) [cSS][-] 5.45 93.22; 151.83 58.62 -65.54 0.07 46.98
HP_ribozyme 3I2Q 11!B:24!B G:A rpS(sb:O2*-N3) [---][-] 5.52 152.01; 93.49 58.52 -74.04 1.4 50.24
HP_ribozyme 3I2Q 15!B:49!C G:C WC [cWW][XIX] 10.64 54.81; 56.88 2.06 -8.75 0.44 6.81
HP_ribozyme 3I2Q 16!B:48!C G:C WC [cWW][XIX] 10.67 52.62; 56.08 3.46 -8.45 0.26 15.73
HP_ribozyme 3I2Q 17!B:47!C C:G WC [cWW][XIX] 10.62 56.4; 58.04 1.65 -6.25 0.22 11.55
HP_ribozyme 3I2Q 18!B:46!C A:U WC [cWW][XX] 10.33 58.36; 59.02 0.66 -2.08 0.12 8.88
HP_ribozyme 3I2Q 19!B:45!C G:C WC [cWW][XIX] 10.36 56.79; 59.92 3.13 1.05 0.1 10.19
HP_ribozyme 3I2Q 20!B:44!C A:C Wb* [cWW][-] 10.23 76.54; 50.93 25.61 1.18 0.36 16.19
HP_ribozyme 3I2Q 21!B:43!C G:A S [tSH][XI] 9.45 97.73; 3.05 94.68 36.54 0.06 7.64
HP_ribozyme 3I2Q 22!B:41!C A:U rH_1 [tWH][XXIV] 9.85 20.93; 33.51 12.58 -171.3 0.26 7.72
HP_ribozyme 3I2Q 23!B:40!C A:A rH [tWH][V] 12.67 11.33; 27.9 16.58 172.76 0.56 22.42
HP_ribozyme 3I2Q 24!B:38!C A:A rpS* [---][-] 11.62 5.55; 52.33 46.78 149.16 0.28 11.12
HP_ribozyme 3I2Q 26!B:36!C A:G WC [cWW][VIII] 12.85 46.11; 46.67 0.56 -2.39 0.07 16.83
HP_ribozyme 3I2Q 27!B:36!C C:G WC_Mo [cWW][XIX] 10.18 76.96; 58.15 18.81 -14.14 2.05 10.33
HP_ribozyme 3I2Q 27!B:35!C C:G WC [cWW][XIX] 10.65 53.96; 54.61 0.65 -15.5 0.33 19.85
HP_ribozyme 3I2Q 28!B:34!C A:U WC [cWW][XX] 10.45 53.68; 56.52 2.84 -15.48 0.02 17.52
HP_ribozyme 3I2Q 29!B:33!C C:G WC [cWW][XIX] 10.54 56.28; 55.33 0.95 -11.23 0.41 15.9
HP_ribozyme 3I2Q 30!B:32!C G:C WC [cWW][XIX] 10.85 52.67; 54.2 1.53 -8.37 0.12 11.76
HP_ribozyme 3I2Q 31!B:31!C A:U WC [cWW][XX] 10.6 59.64; 52.76 6.87 -0.19 0.21 6.56