Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3I2R BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HP_ribozyme 3I2R 2!A:13!B C:G WC [cWW][XIX] 10.43 55.97; 54.34 1.63 -10.04 0.18 20.76
HP_ribozyme 3I2R 3!A:12!B C:G WC [cWW][XIX] 10.63 54.57; 51.65 2.92 -6.29 0.01 7.9
HP_ribozyme 3I2R 4!A:11!B C:G WC [cWW][XIX] 10.52 60.94; 54.58 6.36 -0.3 0.04 3.66
HP_ribozyme 3I2R 6!A:25!B G:C WC [cWW][XIX] 10.34 54.27; 55.33 1.06 -10.81 0.51 17.35
HP_ribozyme 3I2R 7!A:8!B U:G S*_1 [tHS][-] 11.24 6.17; 89.84 83.67 30.16 0.13 9.65
HP_ribozyme 3I2R 8!A:7!B C:A Wb* [cWW][-] 11.22 45.69; 71.53 25.84 -1.82 0.18 28.38
HP_ribozyme 3I2R 9!A:6!B C:G WC [cWW][XIX] 10.38 59.82; 59.84 0.02 -3.7 0.51 19.6
HP_ribozyme 3I2R 10!A:5!B A:U WC [cWW][XX] 10.97 55.54; 47.96 7.57 -7.39 0.06 10.9
HP_ribozyme 3I2R 11!A:4!B C:G WC [cWW][XIX] 10.31 58.13; 56.08 2.05 -6.73 0.21 13.01
HP_ribozyme 3I2R 12!A:3!B C:G WC [cWW][XIX] 10.3 57.27; 52.82 4.45 -8.45 0.07 10.58
HP_ribozyme 3I2R 13!A:2!B G:C WC [cWW][XIX] 10.42 58.72; 62.78 4.07 -3.9 0.03 8.76
HP_ribozyme 3I2R 10!B:25!B A:C rpS(sb:O2*-N3) [cSS][-] 5.34 92.69; 150.44 57.75 -63.98 0.4 46.13
HP_ribozyme 3I2R 11!B:24!B G:A rpS(sb:O2*-N3) [---][-] 5.22 152.45; 93.79 58.65 -66.52 1.77 46.0
HP_ribozyme 3I2R 15!B:49!C G:C WC [cWW][XIX] 10.71 51.54; 58.42 6.87 -1.55 0.4 1.81
HP_ribozyme 3I2R 16!B:48!C G:C WC [cWW][XIX] 10.71 50.65; 57.55 6.89 -7.83 0.11 14.51
HP_ribozyme 3I2R 17!B:47!C C:G WC [cWW][XIX] 10.57 55.6; 57.77 2.18 -6.76 0.32 14.06
HP_ribozyme 3I2R 18!B:46!C A:U WC [cWW][XX] 10.21 58.5; 60.04 1.54 -1.45 0.15 7.05
HP_ribozyme 3I2R 19!B:45!C G:C WC [cWW][XIX] 10.27 56.06; 61.32 5.26 0.92 0.0 8.58
HP_ribozyme 3I2R 20!B:44!C A:C Wb* [cWW][-] 10.42 76.69; 50.23 26.46 0.49 0.36 18.46
HP_ribozyme 3I2R 21!B:43!C G:A S [tSH][XI] 9.29 96.52; 1.62 94.89 56.83 0.03 5.5
HP_ribozyme 3I2R 22!B:41!C A:U rH_1 [tWH][XXIV] 9.64 19.96; 33.02 13.06 -165.41 0.47 11.52
HP_ribozyme 3I2R 23!B:40!C A:A rH [tWH][V] 12.57 12.38; 28.93 16.55 171.07 0.55 19.12
HP_ribozyme 3I2R 24!B:38!C A:A rpS* [---][-] 11.77 4.59; 49.44 44.85 152.25 0.11 11.72
HP_ribozyme 3I2R 26!B:36!C A:G WC [cWW][VIII] 12.64 46.86; 47.73 0.87 -11.75 0.17 18.77
HP_ribozyme 3I2R 27!B:36!C C:G WC_Mo [cWW][XIX] 10.08 75.77; 61.53 14.24 -21.48 2.35 13.15
HP_ribozyme 3I2R 27!B:35!C C:G WC [cWW][XIX] 10.54 54.34; 53.66 0.67 -17.54 0.28 17.56
HP_ribozyme 3I2R 28!B:34!C A:U WC [cWW][XX] 10.3 53.37; 56.03 2.66 -15.85 0.21 22.13
HP_ribozyme 3I2R 29!B:33!C C:G WC [cWW][XIX] 10.47 56.54; 56.54 0.01 -7.79 0.28 12.65
HP_ribozyme 3I2R 30!B:32!C G:C WC [cWW][XIX] 10.6 52.62; 54.0 1.39 -7.55 0.2 12.47
HP_ribozyme 3I2R 31!B:31!C A:U WC [cWW][XX] 10.68 55.71; 48.54 7.17 -2.55 0.07 6.93